RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ASCL2Q99929 193 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 AIFM2Q9BRQ8 373 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 FAM103A1Q9BTL3 118 aaKnown RBP13.7□□□□□ -0.22
MCF2L-226ENST00000486210 OR51J1Q9H342 316 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 STAB2Q8WWQ8 2551 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 INMT-MINDY4F8WBC2 141 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 PTTG1O95997 202 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 VDAC1P21796 283 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 FXYD3Q14802 87 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 TNXAQ16473 311 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 ZNF562Q6V9R5 426 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 LGI3Q8N145 548 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 SLC35G3Q8N808 338 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 OR4A5Q8NH83 315 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 IL22RA2Q969J5 263 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 MARVELD1Q9BSK0 173 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 PARP11Q9NR21 331 aa13.69□□□□□ -0.22
MCF2L-226ENST00000486210 GAR1Q9NY12 217 aaKnown RBP13.69□□□□□ -0.22
MCF2L-226ENST00000486210 DBX1A6NMT0 343 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 E7EUB6 86 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 CCL24O00175 119 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 AKR1C2P52895 323 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 OR2B8PP59922 312 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 Q6ZRM9 215 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 H2BFWTQ7Z2G1 175 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 MMD2Q8IY49 270 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 CADM3Q8N126 398 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 OR5M8Q8NGP6 311 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 PRR25Q96S07 402 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 STARD9Q9P2P6 4700 aa13.68□□□□□ -0.22
MCF2L-226ENST00000486210 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 A0A1B0GW64 132 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 CNIH1O95406 144 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 IL5P05113 134 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 ELANEP08246 267 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 HLA-GP17693 338 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 RPL8P62917 257 aaKnown RBP13.67□□□□□ -0.22
MCF2L-226ENST00000486210 FOXE3Q13461 319 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 RGS21Q2M5E4 152 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 GRPEL2Q8TAA5 225 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 ARPC1AQ92747 370 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 WSB1Q9Y6I7 421 aa13.67□□□□□ -0.22
MCF2L-226ENST00000486210 A0A0B4J293 547 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 A0A0B4J2A0 478 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 CGB1A6NKQ9 187 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 G3V318 75 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 ATG12O94817 140 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 SRPXP78539 464 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 RNASE11Q8TAA1 199 aaKnown RBP13.66□□□□□ -0.22
MCF2L-226ENST00000486210 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-226ENST00000486210 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 MITD1Q8WV92 249 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
MCF2L-226ENST00000486210 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
MCF2L-226ENST00000486210 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 SHPKQ9UHJ6 478 aa13.66□□□□□ -0.22
MCF2L-226ENST00000486210 CREBL2O60519 120 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-226ENST00000486210 SNAPC5O75971 98 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 IGF1P05019 195 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
MCF2L-226ENST00000486210 HOXB5P09067 269 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 APELAP0DMC3 54 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 NMSQ5H8A3 153 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 C9orf66Q5T8R8 295 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 LCNL1Q6ZST4 164 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
MCF2L-226ENST00000486210 LSM10Q969L4 123 aaKnown RBP13.65□□□□□ -0.22
MCF2L-226ENST00000486210 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
MCF2L-226ENST00000486210 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 HMX3A6NHT5 357 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 MSGN1A6NI15 193 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 C15orf61A6NNL5 157 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 ADAP1O75689 374 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 ACTL6BO94805 426 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 MAS1LP35410 378 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 RPL27AP46776 148 aaKnown RBP13.64□□□□□ -0.23
MCF2L-226ENST00000486210 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-226ENST00000486210 CRIP2P52943 208 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-226ENST00000486210 OXA1LQ15070 435 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 ECSCRQ19T08 205 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 FYTTD1Q96QD9 318 aaKnown RBP13.64□□□□□ -0.23
MCF2L-226ENST00000486210 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 OR51B2Q9Y5P1 312 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 TNCP24821 2201 aa13.64□□□□□ -0.23
MCF2L-226ENST00000486210 TEX22C9J3V5 150 aa13.63□□□□□ -0.23
MCF2L-226ENST00000486210 CFHR3Q02985 330 aa13.63□□□□□ -0.23
MCF2L-226ENST00000486210 DEFB136Q30KP8 78 aa13.63□□□□□ -0.23
MCF2L-226ENST00000486210 CACNG5Q9UF02 275 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms