RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 LSM10Q969L4 123 aaKnown RBP16.65■□□□□ 0.26
HLA-F-228ENST00000486194 TM2D3Q9BRN9 247 aa16.65■□□□□ 0.26
HLA-F-228ENST00000486194 SLC2A8Q9NY64 477 aa16.65■□□□□ 0.26
HLA-F-228ENST00000486194 S4R3C0 116 aa16.65■□□□□ 0.26
HLA-F-228ENST00000486194 IZUMO1RA6ND01 250 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 MFSD2BA6NFX1 497 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 IFNA6P05013 189 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 CLEC3BP05452 202 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 SERPINE2P07093 398 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 OR13C7P0DN81 318 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 PTBP1P26599 531 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-F-228ENST00000486194 G6PCP35575 357 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 DEFB114Q30KQ6 69 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 GPR107Q5VW38 600 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 ADAMTSL5Q6ZMM2 481 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 OR10W1Q8NGF6 305 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 OR5B3Q8NH48 314 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 VN1R17PQ8TDU5 208 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 MRPS26Q9BYN8 205 aaKnown RBP16.64■□□□□ 0.25
HLA-F-228ENST00000486194 NAA50Q9GZZ1 169 aaKnown RBP16.64■□□□□ 0.25
HLA-F-228ENST00000486194 NDUFA4L2Q9NRX3 87 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 OR51B2Q9Y5P1 312 aa16.64■□□□□ 0.25
HLA-F-228ENST00000486194 ZNF320A2RRD8 509 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 A8MWP6 167 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 TBC1D26Q86UD7 250 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 OR1L6Q8NGR2 347 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 ZNF502Q8TBZ5 544 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 TMEM56Q96MV1 263 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 HINT2Q9BX68 163 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 PALMDQ9NP74 551 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 TENM3Q9P273 2699 aa16.63■□□□□ 0.25
HLA-F-228ENST00000486194 TBPP20226 339 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 CBLN1P23435 193 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 CD81P60033 236 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 WT1-ASQ06250 92 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 RNASE10Q5GAN6 216 aaKnown RBP16.62■□□□□ 0.25
HLA-F-228ENST00000486194 PLET1Q6UQ28 207 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 GPR141Q7Z602 305 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 ZC4H2Q9NQZ6 224 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
HLA-F-228ENST00000486194 GPR183P32249 361 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 SLC25A24Q6NUK1 477 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 ARRDC1Q8N5I2 433 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 MARC2Q969Z3 335 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 ZNF486Q96H40 463 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-228ENST00000486194 ATP6V0BQ99437 205 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 NEURL2Q9BR09 285 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 SPATA25Q9BR10 227 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 NSG2Q9Y328 171 aa16.61■□□□□ 0.25
HLA-F-228ENST00000486194 F11RQ9Y624 299 aaKnown RBP16.61■□□□□ 0.25
HLA-F-228ENST00000486194 C15orf61A6NNL5 157 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 ZNF785A8K8V0 405 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 M0QYG6 137 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 GUCA2BQ16661 112 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 H2BFWTQ7Z2G1 175 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 MUC7Q8TAX7 377 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 TMEM14BQ9NUH8 114 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 UFC1Q9Y3C8 167 aa16.6■□□□□ 0.25
HLA-F-228ENST00000486194 TMEM213A2RRL7 107 aa16.59■□□□□ 0.25
HLA-F-228ENST00000486194 ELLP55199 621 aaPredicted RBP16.59■□□□□ 0.25
HLA-F-228ENST00000486194 ZNF57Q68EA5 555 aaPredicted RBP16.59■□□□□ 0.25
HLA-F-228ENST00000486194 OR4A16Q8NH70 328 aa16.59■□□□□ 0.25
HLA-F-228ENST00000486194 MTFP1Q9UDX5 166 aa16.59■□□□□ 0.25
HLA-F-228ENST00000486194 TGOLN2O43493 480 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 PGAM2P15259 253 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 RND3P61587 244 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 HAGHQ16775 308 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 RNASE12Q5GAN4 147 aaKnown RBP16.58■□□□□ 0.24
HLA-F-228ENST00000486194 SPSB3Q6PJ21 355 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 SLC16A13Q7RTY0 426 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 UXS1Q8NBZ7 420 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 OR52I2Q8NH67 350 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 BSCL2Q96G97 398 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-228ENST00000486194 SEC22AQ96IW7 307 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 CITED4Q96RK1 184 aa16.58■□□□□ 0.24
HLA-F-228ENST00000486194 RGS5O15539 181 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 CD3DP04234 171 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 ALDH3B2P48448 385 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 CACNG8Q8WXS5 425 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 ZNF436Q9C0F3 470 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-228ENST00000486194 PLEKHA3Q9HB20 300 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 C21orf62Q9NYP8 219 aa16.57■□□□□ 0.24
HLA-F-228ENST00000486194 MRPL27Q9P0M9 148 aaKnown RBP16.57■□□□□ 0.24
HLA-F-228ENST00000486194 STAB2Q8WWQ8 2551 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 ATG12O94817 140 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 CD7P09564 240 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 EDN2P20800 178 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 TAS2R19P59542 299 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 MRPS10P82664 201 aaKnown RBP16.56■□□□□ 0.24
HLA-F-228ENST00000486194 SSBP1Q04837 148 aaKnown RBP16.56■□□□□ 0.24
HLA-F-228ENST00000486194 ANKRD55Q3KP44 614 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 LHFPL1Q86WI0 220 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 OR1P1Q8NH06 330 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 ZFAND1Q8TCF1 268 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 WDR89Q96FK6 387 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-228ENST00000486194 ABHD1Q96SE0 405 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 GAR1Q9NY12 217 aaKnown RBP16.56■□□□□ 0.24
HLA-F-228ENST00000486194 CEPT1Q9Y6K0 416 aa16.56■□□□□ 0.24
HLA-F-228ENST00000486194 TRAV25A0A0B4J276 109 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms