RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FAM209BQ5JX69 171 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 CTRB2Q6GPI1 263 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 C19orf35Q6ZS72 473 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 OR13C8Q8NGS7 320 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 MRGPRFQ96AM1 343 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 EEF1AKMT3Q96AZ1 226 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 TMEM56Q96MV1 263 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 PRR25Q96S07 402 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 SRSF8Q9BRL6 282 aaKnown RBP9.62□□□□□ -0.87
PTCD1-205ENST00000485746 NXF2Q9GZY0 626 aaKnown RBP9.62□□□□□ -0.87
PTCD1-205ENST00000485746 MCUBQ9NWR8 336 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 THYN1Q9P016 225 aa9.62□□□□□ -0.87
PTCD1-205ENST00000485746 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
PTCD1-205ENST00000485746 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
PTCD1-205ENST00000485746 A0A1B0GW64 132 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 H0Y980 276 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 NDUFB8O95169 186 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 IGHV3-23P01764 117 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 CTSDP07339 412 aaPredicted RBP9.61□□□□□ -0.87
PTCD1-205ENST00000485746 FGF2P09038 288 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 AKR1C2P52895 323 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 KLF5Q13887 457 aaPredicted RBP9.61□□□□□ -0.87
PTCD1-205ENST00000485746 HSD17B13Q7Z5P4 300 aaPredicted RBP9.61□□□□□ -0.87
PTCD1-205ENST00000485746 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 OR4C16Q8NGL9 310 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 SCGB3A2Q96PL1 93 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 PRRT1Q99946 306 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 THAP7Q9BT49 309 aaPredicted RBP9.61□□□□□ -0.87
PTCD1-205ENST00000485746 SCP2D1Q9UJQ7 156 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 S4R3C0 116 aa9.61□□□□□ -0.87
PTCD1-205ENST00000485746 ANKRD20A5PA0PJZ0 165 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 ZNF701M0R085 212 aaPredicted RBP9.6□□□□□ -0.87
PTCD1-205ENST00000485746 PTBP1P26599 531 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCD1-205ENST00000485746 FAUP35544 74 aaKnown RBP9.6□□□□□ -0.87
PTCD1-205ENST00000485746 AP3S2P59780 193 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 SP6Q3SY56 376 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 CLEC19AQ6UXS0 136 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 CADM3Q8N126 398 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 OR9G4Q8NGQ1 327 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
PTCD1-205ENST00000485746 RRNAD1Q96FB5 475 aaKnown RBP9.6□□□□□ -0.87
PTCD1-205ENST00000485746 SEC22AQ96IW7 307 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 CXorf58Q96LI9 332 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 FANCD2OSQ96PS1 177 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 TP53RKQ96S44 253 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 PEMTQ9UBM1 199 aa9.6□□□□□ -0.87
PTCD1-205ENST00000485746 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 C15orf61A6NNL5 157 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 GGCTO75223 188 aaKnown RBP9.59□□□□□ -0.87
PTCD1-205ENST00000485746 B3GALNT1O75752 331 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 IGKV1-39P01597 117 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 IGKV1D-39P04432 117 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 ARL3P36405 182 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 INPP1P49441 399 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 CD69Q07108 199 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 SPANXN2Q5MJ10 180 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 Q8N402 240 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 TOMM5Q8N4H5 51 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 SOSTQ9BQB4 213 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
PTCD1-205ENST00000485746 RBM38Q9H0Z9 239 aaKnown RBP9.59□□□□□ -0.87
PTCD1-205ENST00000485746 IGLV11-55A0A075B6I3 123 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 TRBV7-1A0A0A6YYK4 115 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 BMPR1BO00238 502 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 OR2C1O95371 312 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 IFNA17P01571 189 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 SPNP16150 400 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
PTCD1-205ENST00000485746 SURF2Q15527 256 aaPredicted RBP9.58□□□□□ -0.88
PTCD1-205ENST00000485746 FAM106AQ4KMX7 169 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 SGPP2Q8IWX5 399 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 GDPD1Q8N9F7 314 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 OR1L6Q8NGR2 347 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 NDUFA13Q9P0J0 144 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 KCNIP3Q9Y2W7 256 aa9.58□□□□□ -0.88
PTCD1-205ENST00000485746 IGHV3-21A0A0B4J1V1 117 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 ZNF320A2RRD8 509 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 MFSD2BA6NFX1 497 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 HLA-AP01891 365 aaKnown RBP9.57□□□□□ -0.88
PTCD1-205ENST00000485746 CLEC3BP05452 202 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 OR5AC1P0C628 307 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 GP9P14770 177 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 HSPE1P61604 102 aaKnown RBP9.57□□□□□ -0.88
PTCD1-205ENST00000485746 DHODHQ02127 395 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 WT1-ASQ06250 92 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 ZNF57Q68EA5 555 aaPredicted RBP9.57□□□□□ -0.88
PTCD1-205ENST00000485746 HAPLN4Q86UW8 402 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms