RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 IGHV3-74A0A0B4J1X5 117 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 TMEM272A0A1B0GTI8 110 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 RPS10-NUDT3A0A1W2PQS6 291 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 KNCNA6PVL3 124 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 E7EUB6 86 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 K7EMT4 169 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 DNASE2O00115 360 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 NDUFA4O00483 81 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CREBL2O60519 120 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 PDCD6O75340 191 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CRTAPO75718 401 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CRYZL1O95825 349 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CRYGCP07315 174 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 SAA1P0DJI8 122 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 HIST1H1BP16401 226 aaKnown RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 MGMTP16455 207 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 BDKRB2P30411 391 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CCL18P55774 89 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 PPP3R1P63098 170 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 FAM222AQ5U5X8 452 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 MMD2Q8IY49 270 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 TMEM116Q8NCL8 245 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 OR5AK2Q8NH90 309 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 DEFB104AQ8WTQ1 72 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 PTX4Q96A99 478 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 ORAI1Q96D31 301 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CMTM5Q96DZ9 223 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 C4orf36Q96KX1 117 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 ATP6V1G3Q96LB4 118 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF184Q99676 751 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 NIPSNAP3BQ9BS92 247 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 FAAP24Q9BTP7 215 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 THTPAQ9BU02 230 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 Q9H8V8 135 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 CHMP1AQ9HD42 196 aaPredicted RBP3.7□□□□□ -1.82
PTPN4-210ENST00000485247 SDHAF2Q9NX18 166 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 LINC00588Q9Y4M8 146 aa3.7□□□□□ -1.82
PTPN4-210ENST00000485247 VPS13BQ7Z7G8 4022 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 IGHV7-4-1A0A0J9YVY3 117 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 TMEM212A6NML5 194 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 DFFBO76075 338 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 FAM107AO95990 144 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 CD2P06729 351 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 RRASP10301 218 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 PTBP1P26599 531 aaKnown RBP eCLIP3.69□□□□□ -1.82
PTPN4-210ENST00000485247 MAS1LP35410 378 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 ASIPP42127 132 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 RPL27AP46776 148 aaKnown RBP3.69□□□□□ -1.82
PTPN4-210ENST00000485247 PSMD7P51665 324 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 MNAT1P51948 309 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 CDK10Q15131 360 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 C12orf73Q69YU5 71 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 TCF24Q7RTU0 167 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 C6orf201Q7Z4U5 140 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 VKORC1L1Q8N0U8 176 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 OR6M1Q8NGM8 313 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 DCUN1D5Q9BTE7 237 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 OR2D2Q9H210 308 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 RIBC2Q9H4K1 309 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 RDH8Q9NYR8 311 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
PTPN4-210ENST00000485247 IGHV3OR16-12A0A075B7B8 117 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 IGHV3-21A0A0B4J1V1 117 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 A0A1W2PPQ1 181 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 TMEM189A5PLL7 270 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 E9PI62 339 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 NUPL2O15504 423 aaKnown RBP3.68□□□□□ -1.82
PTPN4-210ENST00000485247 YIF1AO95070 293 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 NAPSAO96009 420 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF735P0CB33 412 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 DAPP51397 102 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 OR2B8PP59922 312 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 HLA-DRB3P79483 266 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 TPBGQ13641 420 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 IRF3Q14653 427 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 USF2Q15853 346 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-210ENST00000485247 ATP6AP1Q15904 470 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 KLK9Q2XQG4 91 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 TTC32Q5I0X7 151 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 ACTL10Q5JWF8 245 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 UBE2UQ5VVX9 321 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 GSG1LQ6UXU4 331 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 SSX7Q7RTT5 188 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 DHFR2Q86XF0 187 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 DEFB107AQ8IZN7 70 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 JAGN1Q8N5M9 183 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 UBAC2Q8NBM4 344 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-210ENST00000485247 BSCL2Q96G97 398 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-210ENST00000485247 C5orf30Q96GV9 206 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF414Q96IQ9 312 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 NEDD4LQ96PU5 975 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 RABAC1Q9UI14 185 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 KLK9Q9UKQ9 250 aa3.68□□□□□ -1.82
PTPN4-210ENST00000485247 TRAV14DV4A0A0A6YYC5 116 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 IGKV1-6A0A0C4DH72 117 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms