RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TOMM6Q96B49 74 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 C11orf68Q9H3H3 251 aaKnown RBP2.3□□□□□ -2.04
VPS13A-211ENST00000484581 ENY2Q9NPA8 101 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 OPTCQ9UBM4 332 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 FUT9Q9Y231 359 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF532Q9HCE3 1301 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 NACADO15069 1562 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 KIF13BQ9NQT8 1826 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 PTPRSQ13332 1948 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 MYO16Q9Y6X6 1858 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 ROBO3Q96MS0 1386 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 TRGV5A0A0B4J1U4 118 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 A0A0J9YW62 118 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 EXOC1LA0A1B0GW35 172 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 PIRO00625 290 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF682O95780 498 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 RBP1P09455 135 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 P0C880 135 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 SMIM10L2AP0DMW4 78 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 SMIM10L2BP0DMW5 78 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 GZMHP20718 246 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 CA5AP35218 305 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 DEFA1P59665 94 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 RPL18Q07020 188 aaKnown RBP2.29□□□□□ -2.04
VPS13A-211ENST00000484581 C12orf74Q32Q52 190 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
VPS13A-211ENST00000484581 LYG2Q86SG7 212 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 C12orf45Q8N5I9 185 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-211ENST00000484581 GNPDA2Q8TDQ7 276 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 CCDC90BQ9GZT6 254 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 PARVBQ9HBI1 364 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 IL36BQ9NZH7 164 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 RBM7Q9Y580 266 aaKnown RBP2.29□□□□□ -2.04
VPS13A-211ENST00000484581 MYO9BQ13459 2157 aa2.29□□□□□ -2.04
VPS13A-211ENST00000484581 MAST2Q6P0Q8 1798 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 HECW2Q9P2P5 1572 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 RTL1A6NKG5 1358 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 TRAV9-1A0A075B6T8 112 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 hCG_1818297A0A087WSY0 165 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 DPRXA6NFQ7 191 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 A8MT66 165 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 C8GP07360 202 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 CCR2P41597 374 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 HSPE1P61604 102 aaKnown RBP2.28□□□□□ -2.04
VPS13A-211ENST00000484581 B2MP61769 119 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 HIST1H4AP62805 103 aaKnown RBP2.28□□□□□ -2.04
VPS13A-211ENST00000484581 POU6F1Q14863 301 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 LHFPL1Q86WI0 220 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 ANP32BQ92688 251 aaKnown RBP2.28□□□□□ -2.04
VPS13A-211ENST00000484581 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 ATPIF1Q9UII2 106 aa2.28□□□□□ -2.04
VPS13A-211ENST00000484581 HEATR5AQ86XA9 2040 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 SCN10AQ9Y5Y9 1956 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 SLX4Q8IY92 1834 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 E7EQL1 145 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 KLRC4O43908 158 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 CREBL2O60519 120 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-211ENST00000484581 OR4E1P0C645 316 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 PPIBP23284 216 aaKnown RBP2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BOP23527 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BBP33778 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BDP58876 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BCP62807 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 TAF9Q16594 264 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST2H2BEQ16778 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-211ENST00000484581 IBA57Q5T440 356 aaKnown RBP2.27□□□□□ -2.05
VPS13A-211ENST00000484581 AADACL3Q5VUY0 350 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF705AQ6ZN79 300 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-211ENST00000484581 SLC7A6Q92536 515 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BHQ93079 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BNQ99877 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 HIST1H2BMQ99879 126 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 SELENOSQ9BQE4 189 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 DERL1Q9BUN8 251 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 VCX3BQ9H321 246 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 GID8Q9NWU2 228 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 CCL26Q9Y258 94 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 REREQ9P2R6 1566 aa2.27□□□□□ -2.05
VPS13A-211ENST00000484581 IGKV1D-43A0A0B4J1Z2 117 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 MUC21A0A0G2JKD1 596 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 MUC21A0A140T8X8 626 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 C2orf74A8MZ97 194 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 ZNF73O43830 326 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-211ENST00000484581 IFNA10P01566 189 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 IGKV1-5P01602 117 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 HLA-DMBP28068 263 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 PABPC1L2AQ5JQF8 200 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 HCP5Q6MZN7 132 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 DYNAPQ8N1N2 210 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 NEK7Q8TDX7 302 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 IMMP2LQ96T52 175 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 OR8D2Q9GZM6 311 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 TUBA4BQ9H853 241 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 MYH11P35749 1972 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 MALRD1Q5VYJ5 2156 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 KIAA2026Q5HYC2 2103 aa2.26□□□□□ -2.05
VPS13A-211ENST00000484581 GREB1Q4ZG55 1949 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms