RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 FAM19A2Q8N3H0 131 aa0.64□□□□□ -2.31
ERCC8-206ENST00000484330 PIGXQ8TBF5 258 aa0.64□□□□□ -2.31
ERCC8-206ENST00000484330 DIRAS2Q96HU8 199 aa0.64□□□□□ -2.31
ERCC8-206ENST00000484330 OR8D2Q9GZM6 311 aa0.64□□□□□ -2.31
ERCC8-206ENST00000484330 IMP3Q9NV31 184 aaKnown RBP0.64□□□□□ -2.31
ERCC8-206ENST00000484330 C3orf18Q9UK00 162 aa0.64□□□□□ -2.31
ERCC8-206ENST00000484330 CHD5Q8TDI0 1954 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.63□□□□□ -2.31
ERCC8-206ENST00000484330 A0A087WX48 190 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 C1orf232A0A0U1RR37 186 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 FABP5P3A8MUU1 101 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 FAM228BP0C875 321 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 CCL1P22362 96 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 RPL12P30050 165 aaKnown RBP0.63□□□□□ -2.31
ERCC8-206ENST00000484330 EIF2B2P49770 351 aaKnown RBP0.63□□□□□ -2.31
ERCC8-206ENST00000484330 ZNF80P51504 273 aaPredicted RBP0.63□□□□□ -2.31
ERCC8-206ENST00000484330 RUNX1Q01196 453 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 RSU1Q15404 277 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 LRRN1Q6UXK5 716 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 ZNF550Q7Z398 422 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 WFDC11Q8NEX6 87 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 MCFD2Q8NI22 146 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 HDHD2Q9H0R4 259 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 FGFR1OP2Q9NVK5 253 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 IL36BQ9NZH7 164 aa0.63□□□□□ -2.31
ERCC8-206ENST00000484330 SIPA1L1O43166 1804 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 KIF24Q5T7B8 1368 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 TMEM212A6NML5 194 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 SLC16A4O15374 487 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 OR5F1O95221 314 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 REG1AP05451 166 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 RPS4Y1P22090 263 aaKnown RBP0.62□□□□□ -2.31
ERCC8-206ENST00000484330 MARCKSL1P49006 195 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 IFITM2Q01629 132 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 OR5B17Q8NGF7 314 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 AQP3Q92482 292 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 TMEM106AQ96A25 262 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 CNBD2Q96M20 576 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 DRC3Q9H069 523 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 USE1Q9NZ43 259 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 DCCP43146 1447 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 GLI3P10071 1580 aa0.62□□□□□ -2.31
ERCC8-206ENST00000484330 COCHO43405 550 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 PRM2P04554 102 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 KRT7P08729 469 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 RNASE3P12724 160 aaKnown RBP0.61□□□□□ -2.31
ERCC8-206ENST00000484330 SUPT4H1P63272 117 aaKnown RBP0.61□□□□□ -2.31
ERCC8-206ENST00000484330 CCL20P78556 96 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 MLLT11Q13015 90 aaPredicted RBP0.61□□□□□ -2.31
ERCC8-206ENST00000484330 GRK1Q15835 563 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 COQ5Q5HYK3 327 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 CLVS2Q5SYC1 327 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 C1orf195Q5TG92 126 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 SYPL2Q5VXT5 272 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 DEFB125Q8N687 156 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 OR4D11Q8NGI4 311 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 RASSF5Q8WWW0 418 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 UPF3BQ9BZI7 483 aaKnown RBP0.61□□□□□ -2.31
ERCC8-206ENST00000484330 EFCAB1Q9HAE3 211 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 CKLFQ9UBR5 152 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 BRWD1Q9NSI6 2320 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 TTC21AQ8NDW8 1320 aa0.61□□□□□ -2.31
ERCC8-206ENST00000484330 DIDO1Q9BTC0 2240 aaKnown RBP0.6□□□□□ -2.31
ERCC8-206ENST00000484330 TRBV20OR9-2A0A075B6H5 130 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 LRRN3E7EW58 273 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 GOLGA6L19H0YKK7 550 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 M0QZ92 97 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 CXCR6O00574 342 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 PRB4P10163 310 aaPredicted RBP0.6□□□□□ -2.31
ERCC8-206ENST00000484330 COX5BP10606 129 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 MAP2K4P45985 399 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 BLVRAP53004 296 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 MAP3K7CLP57077 242 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 UBE2IP63279 158 aaKnown RBP0.6□□□□□ -2.31
ERCC8-206ENST00000484330 ZNF846Q147U1 533 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 NUMA1Q14980 2115 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 PDPK2PQ6A1A2 396 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 FAM151BQ6UXP7 276 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 DEFB128Q7Z7B8 93 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 LINC00526Q96FQ7 95 aa0.6□□□□□ -2.31
ERCC8-206ENST00000484330 TRBV6-7A0A0A0MS04 114 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 CASQ1P31415 396 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 BRS3P32247 399 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 MAGEA2P43356 314 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 NAA20P61599 178 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 SPANXN5Q5MJ07 72 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 SPANXN3Q5MJ09 141 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 ZNF826PQ6ZT77 177 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 PHF13Q86YI8 300 aaPredicted RBP0.59□□□□□ -2.31
ERCC8-206ENST00000484330 GID4Q8IVV7 300 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 IQCF2Q8IXL9 164 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 C10orf67Q8IYJ2 551 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 SCGB3A1Q96QR1 104 aa0.59□□□□□ -2.31
ERCC8-206ENST00000484330 NOTCH1P46531 2555 aa0.58□□□□□ -2.32
ERCC8-206ENST00000484330 C9orf84Q5VXU9 1444 aa0.58□□□□□ -2.32
ERCC8-206ENST00000484330 FREM1Q5H8C1 2179 aa0.58□□□□□ -2.32
ERCC8-206ENST00000484330 H0Y980 276 aa0.58□□□□□ -2.32
ERCC8-206ENST00000484330 ACOX3O15254 700 aa0.58□□□□□ -2.32
ERCC8-206ENST00000484330 DEXIO95424 95 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms