RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 SELENOKQ9Y6D0 94 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 CCDC160A6NGH7 325 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 SNAPC5O75971 98 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 TPPPO94811 219 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 OR2C1O95371 312 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 CD74P04233 296 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 CSN3P07498 182 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
MSH5-216ENST00000484309 ARL3P36405 182 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
MSH5-216ENST00000484309 PIGPP57054 158 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 IZUMO4Q1ZYL8 232 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 OR1L8Q8NGR8 309 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 SMIM4Q8WVI0 70 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 SEC22AQ96IW7 307 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
MSH5-216ENST00000484309 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 CEPT1Q9Y6K0 416 aa9.35□□□□□ -0.91
MSH5-216ENST00000484309 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 C15orf61A6NNL5 157 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 TBPP20226 339 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 SLC25A24Q6NUK1 477 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 H2BFWTQ7Z2G1 175 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 OR13C8Q8NGS7 320 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 PEMTQ9UBM1 199 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 PRNDQ9UKY0 176 aa9.34□□□□□ -0.91
MSH5-216ENST00000484309 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 H0Y980 276 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 GGCTO75223 188 aaKnown RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 SERPINE2P07093 398 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 GPR183P32249 361 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 MFAP2P55001 183 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 RND3P61587 244 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 MRPS10P82664 201 aaKnown RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 SP6Q3SY56 376 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 SPINK9Q5DT21 86 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 THOC7Q6I9Y2 204 aaKnown RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 ADAMTSL5Q6ZMM2 481 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 OR4C16Q8NGL9 310 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 OR4A16Q8NH70 328 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 TERB2Q8NHR7 220 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 CACNG8Q8WXS5 425 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 ZNF486Q96H40 463 aaPredicted RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 FAM212BQ9NTI7 297 aaPredicted RBP9.33□□□□□ -0.92
MSH5-216ENST00000484309 COPZ2Q9P299 210 aa9.33□□□□□ -0.92
MSH5-216ENST00000484309 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 CLEC3BP05452 202 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 FGF2P09038 288 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 FRMD6-AS1P0C7T7 363 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 AKAIN1P0CW23 69 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 PTBP1P26599 531 aaKnown RBP eCLIP9.32□□□□□ -0.92
MSH5-216ENST00000484309 TNFSF8P32971 234 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 AKR1C2P52895 323 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 SSBP1Q04837 148 aaKnown RBP9.32□□□□□ -0.92
MSH5-216ENST00000484309 MEF2DQ14814 521 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 KLK9Q2XQG4 91 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 TRIM16LQ309B1 348 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 CCDC71LQ8N9Z2 235 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 ZFAND1Q8TCF1 268 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 DYNLRB2Q8TF09 96 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 CXorf58Q96LI9 332 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 TSC22D3Q99576 134 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 SRSF8Q9BRL6 282 aaKnown RBP9.32□□□□□ -0.92
MSH5-216ENST00000484309 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 KLK9Q9UKQ9 250 aa9.32□□□□□ -0.92
MSH5-216ENST00000484309 F11RQ9Y624 299 aaKnown RBP9.32□□□□□ -0.92
MSH5-216ENST00000484309 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 ZNF320A2RRD8 509 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 C2orf70A6NJV1 201 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 DISC1C4P0D8 188 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 CTDSPLO15194 276 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 CTSDP07339 412 aaPredicted RBP9.31□□□□□ -0.92
MSH5-216ENST00000484309 FAM209BQ5JX69 171 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
MSH5-216ENST00000484309 Q8N1Y9 231 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 TMEM56Q96MV1 263 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 NXF2Q9GZY0 626 aaKnown RBP9.31□□□□□ -0.92
MSH5-216ENST00000484309 FKBP11Q9NYL4 201 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 THYN1Q9P016 225 aa9.31□□□□□ -0.92
MSH5-216ENST00000484309 C14orf166Q9Y224 244 aaKnown RBP9.31□□□□□ -0.92
MSH5-216ENST00000484309 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 OR2T8A6NH00 312 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 CYB5BO43169 146 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 FOLR2P14207 255 aa9.3□□□□□ -0.92
MSH5-216ENST00000484309 CD300EQ496F6 205 aaPredicted RBP9.3□□□□□ -0.92
MSH5-216ENST00000484309 LCN12Q6JVE5 192 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms