RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 RHOBP62745 196 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ERHP84090 104 aaKnown RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 SSX2Q16385 188 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 BSXQ3C1V8 233 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ARSJQ5FYB0 599 aaPredicted RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 TGIF2LYQ8IUE0 185 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 MRPL41Q8IXM3 137 aaKnown RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ZFP82Q8N141 532 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 PNKDQ8N490 385 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 OR10X1Q8NGY0 326 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 OR4F5Q8NH21 305 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 TMEM167AQ8TBQ9 72 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 CACNG8Q8WXS5 425 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 FLYWCH2Q96CP2 140 aaKnown RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ANAPC16Q96DE5 110 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 BTF3L4Q96K17 158 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 SLC35E1Q96K37 410 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 OR4F4Q96R69 305 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 SSX3Q99909 188 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 MRPL20Q9BYC9 149 aaKnown RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 CHODLQ9H9P2 273 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 DOK5Q9P104 306 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 WASHC3Q9Y3C0 194 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ANKRD11Q6UB99 2663 aaPredicted RBP6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 CELSR3Q9NYQ7 3312 aa6.02□□□□□ -1.45
SHROOM3-206ENST00000484236 ARFGEF3Q5TH69 2177 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 PTPRZ1P23471 2315 aaPredicted RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 SRRM4A7MD48 611 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 C11orf94C9JXX5 98 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 AP4M1O00189 453 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 ATXN7O15265 892 aaPredicted RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 PAGE4O60829 102 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 SAA1P0DJI8 122 aaPredicted RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 CD99P14209 185 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 CCL3L1P16619 93 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 RPS10P46783 165 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 LGALS7P47929 136 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 PPOXP50336 477 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 AKR1D1P51857 326 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 SUB1P53999 127 aaKnown RBP eCLIP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 B2MP61769 119 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 SNRPEP62304 92 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 RPL8P62917 257 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 MIC13Q5XKP0 118 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 TMEM144Q7Z5S9 345 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 ZCCHC24Q8N2G6 241 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 C2CD4CQ8TF44 421 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 Q8WTZ3 238 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 H1FXQ92522 213 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 ST6GALNAC6Q969X2 333 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 HARBI1Q96MB7 349 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 RNF2Q99496 336 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 NABP2Q9BQ15 211 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 COMMD5Q9GZQ3 224 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 PARLQ9H300 379 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 TMPRSS5Q9H3S3 457 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 NDUFA4L2Q9NRX3 87 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 CTSZQ9UBR2 303 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 RALYQ9UKM9 306 aaKnown RBP6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 AKAP13Q12802 2813 aa6.01□□□□□ -1.45
SHROOM3-206ENST00000484236 PTPRQQ9UMZ3 2332 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 DMXL1Q9Y485 3027 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 LOC400499M0QZD8 3231 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 ZNF98A6NK75 572 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 DLL1O00548 723 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 HMGB3O15347 200 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 FCN3O75636 299 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 IGKV1-16P04430 117 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 SMIM6P0DI80 62 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 IGHV1-8P0DP01 117 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 RNASE2P10153 161 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 S100PP25815 95 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 RPL35P42766 123 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 PRRX1P54821 245 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 ERVFRD-1P60508 538 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 RPL23P62829 140 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 NHLH1Q02575 133 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 CD69Q07108 199 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 ADIRFQ15847 76 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 ZNF674Q2M3X9 581 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 VMA21Q3ZAQ7 101 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 LYPD2Q6UXB3 125 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 SPNS3Q6ZMD2 512 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 TGIF2LXQ8IUE1 241 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 IQCF2Q8IXL9 164 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 MUC15Q8N387 334 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 STPG3Q8N7X2 389 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 C8orf46Q8TAG6 207 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 RNASEH2CQ8TDP1 164 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 RPUSD4Q96CM3 377 aaKnown RBP6□□□□□ -1.45
SHROOM3-206ENST00000484236 C1orf159Q96HA4 380 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 FAM210BQ96KR6 192 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 PYGO2Q9BRQ0 406 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 HINT2Q9BX68 163 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 TMEM133Q9H2Q1 129 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 SLC45A2Q9UMX9 530 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 PCNX1Q96RV3 2341 aa6□□□□□ -1.45
SHROOM3-206ENST00000484236 MAP1BP46821 2468 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms