RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 KPTNQ9Y664 436 aa4.38□□□□□ -1.71
COL17A1-206ENST00000483876 MALRD1Q5VYJ5 2156 aa4.38□□□□□ -1.71
COL17A1-206ENST00000483876 RAI1Q7Z5J4 1906 aaPredicted RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TEX50A0A1B0GTY4 177 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TCF21O43680 179 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 ENSAO43768 121 aaKnown RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 FBXO24O75426 580 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TSPAN9O75954 239 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 MBP02144 154 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 IGKV1-16P04430 117 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 ARG1P05089 322 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 METTL15P1P0C7V9 234 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 IAPPP10997 89 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 CD1BP29016 333 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 MAS1LP35410 378 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 CEACAM3P40198 252 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 COMPP49747 757 aaPredicted RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 PDLIM4P50479 330 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 DSCR9P59020 149 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 LMO4P61968 165 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 RAB11AP62491 216 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 PRCDQ00LT1 54 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 PAX2Q02962 417 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 ARL16Q0P5N6 197 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 HABP2Q14520 560 aaPredicted RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 CLINT1Q14677 625 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 BSXQ3C1V8 233 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 PXDC1Q5TGL8 231 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 HAPLN4Q86UW8 402 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM217Q8N7C4 229 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 Q8N7P7 452 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 HSD17B11Q8NBQ5 300 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 OR4P4Q8NGL7 312 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 PCNPQ8WW12 178 aaKnown RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 RBMXL1Q96E39 390 aaKnown RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 OR4C12Q96R67 309 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 MRPL20Q9BYC9 149 aaKnown RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 WDR61Q9GZS3 305 aaKnown RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 ENY2Q9NPA8 101 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 HEYLQ9NQ87 328 aaPredicted RBP4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM160Q9NX00 188 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 DPM3Q9P2X0 92 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 NUP50Q9UKX7 468 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 TCF19Q9Y242 345 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 INSIG2Q9Y5U4 225 aa4.37□□□□□ -1.71
COL17A1-206ENST00000483876 DOCK11Q5JSL3 2073 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TRAV3A0A0B4J244 114 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 IGHV1-3A0A0C4DH29 117 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 A0A1W2PN81 502 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM218A2RU14 115 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 C15orf62A8K5M9 175 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 ODF3BA8MYP8 253 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 VWC2LB2RUY7 222 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 C22orf46C9J442 243 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 PRSS46E5RG02 174 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 H7C2Y5 167 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 I3L521 148 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 NDUFS6O75380 124 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 FOXH1O75593 365 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 LY6HO94772 140 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TSPAN15O95858 294 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 IFNA10P01566 189 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 IGHV2-5P01817 119 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 HBE1P02100 147 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CD5P06127 495 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CRYGBP07316 175 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 ZP3P21754 424 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 HTR1DP28221 377 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CHRNA7P36544 502 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 GPX4P36969 197 aaPredicted RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CDKN1AP38936 164 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CAMLGP49069 296 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 DVL1P1P54792 670 aaPredicted RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 OR2B8PP59922 312 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 RAB2AP61019 212 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 RPS16P62249 146 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 RPL8P62917 257 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 DLK1P80370 383 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 SLC38A11Q08AI6 406 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TUSC1Q2TAM9 212 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM249Q2WGJ8 235 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 VMA21Q3ZAQ7 101 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 C2orf83Q53S99 150 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 C10orf91Q5T1B1 145 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 AKR1C8PQ5T2L2 129 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 MINOS1Q5TGZ0 78 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 CCDC144NLQ6NUI1 221 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 ETV3LQ6ZN32 361 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 Q6ZRG5 221 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 THNSL2Q86YJ6 484 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 MRPL41Q8IXM3 137 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 VKORC1L1Q8N0U8 176 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 LILRB2Q8N423 598 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 OR1L8Q8NGR8 309 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms