RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GGACTQ9BVM4 153 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 COMMD5Q9GZQ3 224 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 TEX50A0A1B0GTY4 177 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 CD1BP29016 333 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 RAB11AP62491 216 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 PRB3Q04118 309 aaPredicted RBP21.15■□□□□ 0.98
SHOX2-204ENST00000483851 VWC2Q2TAL6 325 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 PSMG3Q9BT73 122 aaPredicted RBP21.15■□□□□ 0.98
SHOX2-204ENST00000483851 PLEKHA3Q9HB20 300 aa21.15■□□□□ 0.98
SHOX2-204ENST00000483851 TOX4O94842 621 aa21.14■□□□□ 0.97
SHOX2-204ENST00000483851 HOXB4P17483 251 aaPredicted RBP21.14■□□□□ 0.97
SHOX2-204ENST00000483851 CCDC144NLQ6NUI1 221 aa21.14■□□□□ 0.97
SHOX2-204ENST00000483851 THNSL2Q86YJ6 484 aa21.14■□□□□ 0.97
SHOX2-204ENST00000483851 OR1L8Q8NGR8 309 aa21.14■□□□□ 0.97
SHOX2-204ENST00000483851 SLC35B3Q9H1N7 401 aa21.14■□□□□ 0.97
SHOX2-204ENST00000483851 AKR1C8PQ5T2L2 129 aa21.13■□□□□ 0.97
SHOX2-204ENST00000483851 WDR61Q9GZS3 305 aaKnown RBP21.13■□□□□ 0.97
SHOX2-204ENST00000483851 KIAA1456Q9P272 454 aa21.13■□□□□ 0.97
SHOX2-204ENST00000483851 TBL2Q9Y4P3 447 aaKnown RBP21.13■□□□□ 0.97
SHOX2-204ENST00000483851 TRAV1-1A0A0B4J248 108 aa21.13■□□□□ 0.97
SHOX2-204ENST00000483851 KLRD1Q13241 179 aa21.13■□□□□ 0.97
SHOX2-204ENST00000483851 FBXO7Q9Y3I1 522 aa21.13■□□□□ 0.97
SHOX2-204ENST00000483851 UBE2E1P51965 193 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 LDLRAD2Q5SZI1 272 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 SLC24A4Q8NFF2 622 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 NDUFA4L2Q9NRX3 87 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 LRRK2Q5S007 2527 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 FAM208BQ5VWN6 2430 aa21.12■□□□□ 0.97
SHOX2-204ENST00000483851 IGHV3-72A0A0B4J1Y9 119 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 IGHV4-61A0A0C4DH41 118 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 MAS1LP35410 378 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 PERPQ96FX8 193 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 TIMM9Q9Y5J7 89 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 A0A1B0GV50 99 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 A0A1W2PN81 502 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 RBFOX3A6NFN3 312 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 SLC25A17O43808 307 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 CRYGBP07316 175 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 NPY1RP25929 384 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 CHRNA7P36544 502 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 LGALS4P56470 323 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 SERF2P84101 59 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 ETV3LQ6ZN32 361 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 MMD2Q8IY49 270 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 RARRES2Q99969 163 aa21.11■□□□□ 0.97
SHOX2-204ENST00000483851 ZNF787Q6DD87 383 aa21.1■□□□□ 0.97
SHOX2-204ENST00000483851 CENPVQ7Z7K6 275 aaPredicted RBP21.1■□□□□ 0.97
SHOX2-204ENST00000483851 CFHR4Q92496 578 aa21.1■□□□□ 0.97
SHOX2-204ENST00000483851 TAF15Q92804 592 aaKnown RBP eCLIP21.1■□□□□ 0.97
SHOX2-204ENST00000483851 TBX15Q96SF7 602 aa21.1■□□□□ 0.97
SHOX2-204ENST00000483851 RSG1Q9BU20 258 aa21.1■□□□□ 0.97
SHOX2-204ENST00000483851 ZNF430Q9H8G1 570 aaPredicted RBP21.1■□□□□ 0.97
SHOX2-204ENST00000483851 LPAR2Q9HBW0 351 aa21.1■□□□□ 0.97
SHOX2-204ENST00000483851 TIMM23O14925 209 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 PLA2G2AP14555 144 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 SLC25A16P16260 332 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 PSG5Q15238 335 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 RBMXL1Q96E39 390 aaKnown RBP21.09■□□□□ 0.97
SHOX2-204ENST00000483851 IGHV4-30-2A0A087WSY4 118 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 PRSS46E5RG02 174 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 J3QKU1 62 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 RRHO14718 337 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 VENTXO95231 258 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 DLK1P80370 383 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 PAX8Q06710 450 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 BSXQ3C1V8 233 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 RITA1Q96K30 269 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 HINT2Q9BX68 163 aa21.09■□□□□ 0.97
SHOX2-204ENST00000483851 TNCP24821 2201 aa21.08■□□□□ 0.97
SHOX2-204ENST00000483851 HBE1P02100 147 aa21.08■□□□□ 0.97
SHOX2-204ENST00000483851 PAX6P26367 422 aa21.08■□□□□ 0.97
SHOX2-204ENST00000483851 FAM122CQ6P4D5 195 aa21.08■□□□□ 0.97
SHOX2-204ENST00000483851 RPRMQ9NS64 109 aa21.08■□□□□ 0.97
SHOX2-204ENST00000483851 UBE2L5PA0A1B0GUS4 154 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 MYOD1P15172 320 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 MDKP21741 143 aaPredicted RBP21.07■□□□□ 0.96
SHOX2-204ENST00000483851 ERHP84090 104 aaKnown RBP21.07■□□□□ 0.96
SHOX2-204ENST00000483851 PRSS8Q16651 343 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 C2orf83Q53S99 150 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 LHFPL4Q7Z7J7 247 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 MRPL41Q8IXM3 137 aaKnown RBP21.07■□□□□ 0.96
SHOX2-204ENST00000483851 SFT2D1Q8WV19 159 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 TMEM170AQ8WVE7 144 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 MBD3L1Q8WWY6 194 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 SIGLEC9Q9Y336 463 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 HILPDAQ9Y5L2 63 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 FNDC10F2Z333 226 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 IFNA4P05014 189 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 ZNF506Q5JVG8 444 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 MALSU1Q96EH3 234 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 SMCO4Q9NRQ5 59 aa21.07■□□□□ 0.96
SHOX2-204ENST00000483851 COLCA2A8K830 154 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 SOX15O60248 233 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 MPDU1O75352 247 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 ICAM4Q14773 271 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 MRGPRG-AS1Q2M3A8 158 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 AWAT1Q58HT5 328 aa21.06■□□□□ 0.96
SHOX2-204ENST00000483851 CA2P00918 260 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 SRP19P09132 144 aaKnown RBP21.05■□□□□ 0.96
SHOX2-204ENST00000483851 PPP1R27Q86WC6 154 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms