RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PSMB6P28072 239 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 RPL27AP46776 148 aaKnown RBP5.47□□□□□ -1.53
CSDE1-206ENST00000483030 RPL30P62888 115 aaKnown RBP5.47□□□□□ -1.53
CSDE1-206ENST00000483030 MED22Q15528 200 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 KCTD21Q4G0X4 260 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 LIPKQ5VXJ0 399 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 TMEM217Q8N7C4 229 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 STPG3Q8N7X2 389 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 LHFPL5Q8TAF8 219 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 MARC2Q969Z3 335 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 OR2A7Q96R45 310 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 MND1Q9BWT6 205 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
CSDE1-206ENST00000483030 PRELID3BQ9Y3B1 194 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 TRBV7-1A0A0A6YYK4 115 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KIR2DL5BA0A0G2JN68 375 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KIR2DL5BA0A0G2JPC4 375 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 SERTM2A0A1B0GWG4 89 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 MFSD2BA6NFX1 497 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 ANKRD65E5RJM6 399 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 MFNGO00587 321 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 ARL6IP5O75915 188 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KBTBD11O94819 623 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 DHFRP00374 187 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 REG1AP05451 166 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 ZNF735P0CB33 412 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 DEFA4P12838 97 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 MYOD1P15172 320 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 HIST1H1BP16401 226 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 NFYAP23511 347 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 CRHBPP24387 322 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 GPR183P32249 361 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 TALDO1P37837 337 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 RPS25P62851 125 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 ARFRP1Q13795 201 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 HES5Q5TA89 166 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 Q6ZNX1 250 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KCTD9Q7L273 389 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 GPR141Q7Z602 305 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 PUSL1Q8N0Z8 303 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KIR2DL5AQ8N109 375 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 PACRGLQ8N7B6 248 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 ZNF645Q8N7E2 425 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 OR10R2Q8NGX6 335 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 KIR2DL5BQ8NHK3 375 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 VSTM2AQ8TAG5 236 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 TMEM167AQ8TBQ9 72 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 FBLIM1Q8WUP2 373 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 GATAD1Q8WUU5 269 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 UFD1Q92890 307 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 SPAG8Q99932 426 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 C5orf66Q9H5L9 145 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 TREM1Q9NP99 234 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 PTTG2Q9NZH5 202 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 MRPS7Q9Y2R9 242 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 LSM2Q9Y333 95 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 RBMX2Q9Y388 322 aaKnown RBP5.46□□□□□ -1.54
CSDE1-206ENST00000483030 UFC1Q9Y3C8 167 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 V9GY05 133 aa5.46□□□□□ -1.54
CSDE1-206ENST00000483030 IGLV11-55A0A075B6I3 123 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 IGKV1D-13A0A0B4J2D9 117 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 PCP4L1A6NKN8 68 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 TSPAN4O14817 238 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 S1PR2O95136 353 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 IGLV2-14P01704 120 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 IGKV1-13P0DP09 117 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 RPA2P15927 270 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 HIST1H1DP16402 221 aaKnown RBP5.45□□□□□ -1.54
CSDE1-206ENST00000483030 CD36P16671 472 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 GADD45AP24522 165 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 MAS1LP35410 378 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 TAGLN2P37802 199 aaKnown RBP5.45□□□□□ -1.54
CSDE1-206ENST00000483030 ELLP55199 621 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-206ENST00000483030 BRWD1-AS2P59051 145 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 GNG2P59768 71 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
CSDE1-206ENST00000483030 VAMP2P63027 116 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 ODF3L2Q3SX64 289 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 LAMTOR1Q6IAA8 161 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 PLET1Q6UQ28 207 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 Q6ZS49 121 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 SSX9Q7RTT3 188 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 OR5B3Q8NH48 314 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 OR4S2Q8NH73 311 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 ZNF502Q8TBZ5 544 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 TCTEX1D2Q8WW35 142 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 MAP6D1Q9H9H5 199 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 FBXL17Q9UF56 701 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 ELF5Q9UKW6 265 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-206ENST00000483030 OR2W1Q9Y3N9 320 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
CSDE1-206ENST00000483030 CGB1A6NKQ9 187 aa5.44□□□□□ -1.54
CSDE1-206ENST00000483030 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
CSDE1-206ENST00000483030 SLC22A5O76082 557 aa5.44□□□□□ -1.54
CSDE1-206ENST00000483030 HRASP01112 189 aa5.44□□□□□ -1.54
CSDE1-206ENST00000483030 HLA-DQB1P01920 261 aa5.44□□□□□ -1.54
CSDE1-206ENST00000483030 IFNA4P05014 189 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms