RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 ST8SIA3O43173 380 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 IGHV4-59P01825 116 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 OPN1MWP04001 364 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 OPN1MW2P0DN77 364 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 OPN1MW3P0DN78 364 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 MYOD1P15172 320 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-205ENST00000482968 IER3P46695 156 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 S100A10P60903 97 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 EIF5AP63241 154 aaKnown RBP11.99□□□□□ -0.49
PHGDH-205ENST00000482968 ID3Q02535 119 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 NARS2Q96I59 477 aaKnown RBP11.99□□□□□ -0.49
PHGDH-205ENST00000482968 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 ZNF430Q9H8G1 570 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-205ENST00000482968 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
PHGDH-205ENST00000482968 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 C15orf61A6NNL5 157 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 DNASE2O00115 360 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-205ENST00000482968 FCN1O00602 326 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 NDUFA3O95167 84 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 IFNA17P01571 189 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 PSMB6P28072 239 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 RPL8P62917 257 aaKnown RBP11.98□□□□□ -0.49
PHGDH-205ENST00000482968 MRGPRG-AS1Q2M3A8 158 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 LINC00518Q8N0U6 118 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 SIGLECL1Q8N7X8 197 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 RBM14Q96PK6 669 aaKnown RBP11.98□□□□□ -0.49
PHGDH-205ENST00000482968 SLC25A33Q9BSK2 321 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 TMEM14BQ9NUH8 114 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 MLXQ9UH92 298 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
PHGDH-205ENST00000482968 TPT1P13693 172 aaKnown RBP11.97□□□□□ -0.49
PHGDH-205ENST00000482968 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-205ENST00000482968 POLR2GP62487 172 aaKnown RBP eCLIP11.97□□□□□ -0.49
PHGDH-205ENST00000482968 S100A12P80511 92 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 PRSS8Q16651 343 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 C5orf64Q2M2E5 130 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 Q8N9W7 124 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 BPIFCQ8NFQ6 507 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 PRDM13Q9H4Q3 707 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 OR51B2Q9Y5P1 312 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 HIVEP2P31629 2446 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 A6NDX4 124 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 K7EPK0 472 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-205ENST00000482968 SNAPINO95295 136 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 H2AFB1P0C5Y9 115 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 GNB1P62873 340 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 TNFRSF9Q07011 255 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 FAM71E2Q8N5Q1 922 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 PITPNC1Q9UKF7 332 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 CDC42EP3Q9UKI2 254 aa11.97□□□□□ -0.49
PHGDH-205ENST00000482968 FOXA2Q9Y261 457 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-205ENST00000482968 TEX50A0A1B0GTY4 177 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 BTBD17A6NE02 478 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 WRBO00258 174 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 ACTL6BO94805 426 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 SRD5A1P18405 259 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 TNXAQ16473 311 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 EIF5AL1Q6IS14 154 aaKnown RBP11.96□□□□□ -0.49
PHGDH-205ENST00000482968 STOML3Q8TAV4 291 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 RNF141Q8WVD5 230 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 RASL11BQ9BPW5 248 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 HSPB7Q9UBY9 170 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 POMT1Q9Y6A1 747 aa11.96□□□□□ -0.49
PHGDH-205ENST00000482968 TMEM218A2RU14 115 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 FAM90A26D6RGX4 464 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 E7EUB6 86 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 H0YIZ8 118 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 CHST1O43916 411 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 SSSCA1O60232 199 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 CA2P00918 260 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 HSPE1P61604 102 aaKnown RBP11.95□□□□□ -0.5
PHGDH-205ENST00000482968 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 RBMS3Q6XE24 437 aaKnown RBP11.95□□□□□ -0.5
PHGDH-205ENST00000482968 OR5R1Q8NH85 324 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 SSMEM1Q8WWF3 244 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 RNF126Q9BV68 326 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 RBKSQ9H477 322 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 RCL1Q9Y2P8 373 aaKnown RBP11.95□□□□□ -0.5
PHGDH-205ENST00000482968 MOB4Q9Y3A3 225 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 NUPL2O15504 423 aaKnown RBP11.95□□□□□ -0.5
PHGDH-205ENST00000482968 SYNGR2O43760 224 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 CNIH1O95406 144 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 SPCS3P61009 180 aa11.95□□□□□ -0.5
PHGDH-205ENST00000482968 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms