RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 TERB2Q8NHR7 220 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 PRNDQ9UKY0 176 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 SMAD5-AS1Q9Y6J3 95 aa12.64□□□□□ -0.39
VAMP4-204ENST00000482519 IGLV11-55A0A075B6I3 123 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 GGCTO75223 188 aaKnown RBP12.63□□□□□ -0.39
VAMP4-204ENST00000482519 OR2C1O95371 312 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 IGLV1-51P01701 117 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 CD74P04233 296 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 CSN3P07498 182 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 FGF2P09038 288 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 ARL3P36405 182 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 WT1-ASQ06250 92 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 OR4A16Q8NH70 328 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 MCFD2Q8NI22 146 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 SMIM4Q8WVI0 70 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 ASCL2Q99929 193 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 SRSF8Q9BRL6 282 aaKnown RBP12.63□□□□□ -0.39
VAMP4-204ENST00000482519 SLIRPQ9GZT3 109 aaKnown RBP12.63□□□□□ -0.39
VAMP4-204ENST00000482519 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 COPZ2Q9P299 210 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
VAMP4-204ENST00000482519 MFSD2BA6NFX1 497 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 CYB5BO43169 146 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 IGKV1-39P01597 117 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 IGKV1D-39P04432 117 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
VAMP4-204ENST00000482519 MEF2DQ14814 521 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
VAMP4-204ENST00000482519 SLC25A24Q6NUK1 477 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 OR13C8Q8NGS7 320 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 MARCH1Q8TCQ1 289 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 LSM10Q969L4 123 aaKnown RBP12.62□□□□□ -0.39
VAMP4-204ENST00000482519 ZNF486Q96H40 463 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-204ENST00000482519 CXorf58Q96LI9 332 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 NDUFA4L2Q9NRX3 87 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-204ENST00000482519 FKBP11Q9NYL4 201 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 THYN1Q9P016 225 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 DMRT1Q9Y5R6 373 aa12.62□□□□□ -0.39
VAMP4-204ENST00000482519 ZNF320A2RRD8 509 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 FABP12A6NFH5 140 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 DBX1A6NMT0 343 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 CLEC3BP05452 202 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 TNFSF8P32971 234 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 RND3P61587 244 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 HSD17B13Q7Z5P4 300 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-204ENST00000482519 GDPD1Q8N9F7 314 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 SEC22AQ96IW7 307 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 TP53RKQ96S44 253 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 RABL2AQ9UBK7 228 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-204ENST00000482519 RABL2BQ9UNT1 228 aa12.61□□□□□ -0.39
VAMP4-204ENST00000482519 TRBV7-1A0A0A6YYK4 115 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 C3orf85A0A1B0GTC6 90 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 C15orf61A6NNL5 157 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 DISC1C4P0D8 188 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 H0Y980 276 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 AKAIN1P0CW23 69 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 TRIM16LQ309B1 348 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 SP6Q3SY56 376 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 CADM3Q8N126 398 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 CCDC71LQ8N9Z2 235 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 OR5B3Q8NH48 314 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 TMEM14BQ9NUH8 114 aa12.6□□□□□ -0.39
VAMP4-204ENST00000482519 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
VAMP4-204ENST00000482519 DNAH9Q9NYC9 4486 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 IGHV3-21A0A0B4J1V1 117 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 CTDSPLO15194 276 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.39
VAMP4-204ENST00000482519 GPR183P32249 361 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 AKR1C2P52895 323 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 KLK9Q2XQG4 91 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 OR4C16Q8NGL9 310 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 KLK9Q9UKQ9 250 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
VAMP4-204ENST00000482519 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
VAMP4-204ENST00000482519 TEX13DA0A0J9YY54 714 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-204ENST00000482519 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.4
VAMP4-204ENST00000482519 FAM106AQ4KMX7 169 aa12.58□□□□□ -0.4
VAMP4-204ENST00000482519 LCN12Q6JVE5 192 aa12.58□□□□□ -0.4
VAMP4-204ENST00000482519 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
VAMP4-204ENST00000482519 RNASE11Q8TAA1 199 aaKnown RBP12.58□□□□□ -0.4
VAMP4-204ENST00000482519 ZNF502Q8TBZ5 544 aa12.58□□□□□ -0.4
VAMP4-204ENST00000482519 MCUBQ9NWR8 336 aa12.58□□□□□ -0.4
VAMP4-204ENST00000482519 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
VAMP4-204ENST00000482519 IGHV3-35A0A0C4DH35 117 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-204ENST00000482519 ATG12O94817 140 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 IGKV1-5P01602 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms