RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 CADM3Q8N126 398 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 ZFAND1Q8TCF1 268 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 THYN1Q9P016 225 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 PRNDQ9UKY0 176 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 OR51B2Q9Y5P1 312 aa11.33□□□□□ -0.6
OPTN-210ENST00000482140 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 CTDSPLO15194 276 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
OPTN-210ENST00000482140 IGLV1-51P01701 117 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 CD74P04233 296 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 OR13C7P0DN81 318 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 PI3P19957 117 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
OPTN-210ENST00000482140 PIGPP57054 158 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 RND3P61587 244 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 MEF2DQ14814 521 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 CCDC71LQ8N9Z2 235 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 OR4D10Q8NGI6 311 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 OR4A16Q8NH70 328 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 MCFD2Q8NI22 146 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 COPZ2Q9P299 210 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 SMAD5-AS1Q9Y6J3 95 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 S4R3C0 116 aa11.32□□□□□ -0.6
OPTN-210ENST00000482140 TRBV7-1A0A0A6YYK4 115 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 DISC1C4P0D8 188 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 H0Y980 276 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
OPTN-210ENST00000482140 ARL3P36405 182 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 OR5B3Q8NH48 314 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
OPTN-210ENST00000482140 MRGPRFQ96AM1 343 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
OPTN-210ENST00000482140 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
OPTN-210ENST00000482140 RSL24D1Q9UHA3 163 aaKnown RBP11.31□□□□□ -0.6
OPTN-210ENST00000482140 ATG12O94817 140 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 CSN3P07498 182 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 AKAIN1P0CW23 69 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 SLC25A24Q6NUK1 477 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 FAAP20Q6NZ36 180 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 OR13C8Q8NGS7 320 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 MARCH1Q8TCQ1 289 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 SEC22AQ96IW7 307 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 C14orf166Q9Y224 244 aaKnown RBP11.3□□□□□ -0.6
OPTN-210ENST00000482140 CEPT1Q9Y6K0 416 aa11.3□□□□□ -0.6
OPTN-210ENST00000482140 C3orf85A0A1B0GTC6 90 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 MFSD2BA6NFX1 497 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 OR2C1O95371 312 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 HLA-AP01891 365 aaKnown RBP11.29□□□□□ -0.6
OPTN-210ENST00000482140 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
OPTN-210ENST00000482140 AKR1C2P52895 323 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 WT1-ASQ06250 92 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 IL34Q6ZMJ4 242 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 SIGLEC8Q9NYZ4 499 aa11.29□□□□□ -0.6
OPTN-210ENST00000482140 FABP12A6NFH5 140 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
OPTN-210ENST00000482140 GPR183P32249 361 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 TNFSF8P32971 234 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 Q8N402 240 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 OR4C16Q8NGL9 310 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
OPTN-210ENST00000482140 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
OPTN-210ENST00000482140 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
OPTN-210ENST00000482140 ZNF320A2RRD8 509 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 DBX1A6NMT0 343 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 LGALS9O00182 355 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
OPTN-210ENST00000482140 B3GALNT1O75752 331 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 CLEC3BP05452 202 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
OPTN-210ENST00000482140 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 GPHB5Q86YW7 130 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 ASCL2Q99929 193 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 PRRT1Q99946 306 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
OPTN-210ENST00000482140 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
OPTN-210ENST00000482140 TEX13DA0A0J9YY54 714 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms