RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 C9JCJ5 164 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 MKRN2OSH3BPM6 223 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 AREGP15514 252 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 TEX38Q6PEX7 206 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 DEFB108BQ8NET1 73 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 OR4P4Q8NGL7 312 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 OCC1Q8TAD7 63 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 C14orf144Q96I85 54 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 SLC35E1Q96K37 410 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 SEPSECSQ9HD40 501 aaKnown RBP12.6□□□□□ -0.39
C9orf3-218ENST00000482056 SLC35D1Q9NTN3 355 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 DSCAMO60469 2012 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 hADV38S2A0JD32 116 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 UPK2O00526 184 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 CRYABP02511 175 aaKnown RBP12.6□□□□□ -0.39
C9orf3-218ENST00000482056 IGFBP2P18065 325 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
C9orf3-218ENST00000482056 PRR20EP86478 221 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 PRR20CP86479 221 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 PRR20DP86480 221 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 PRR20BP86481 221 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 PRR20AP86496 221 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF788Q6ZQV5 615 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 GBGT1Q8N5D6 347 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 CCL13Q99616 98 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 C19orf24Q9BVV8 132 aa12.6□□□□□ -0.39
C9orf3-218ENST00000482056 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
C9orf3-218ENST00000482056 TRBV20OR9-2A0A075B6H5 130 aa12.59□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF705GA8MUZ8 300 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-218ENST00000482056 ZNF90Q03938 601 aa12.59□□□□□ -0.39
C9orf3-218ENST00000482056 UTF1Q5T230 341 aa12.59□□□□□ -0.39
C9orf3-218ENST00000482056 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
C9orf3-218ENST00000482056 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
C9orf3-218ENST00000482056 ZCCHC14Q8WYQ9 949 aaKnown RBP12.59□□□□□ -0.39
C9orf3-218ENST00000482056 PARD6AQ9NPB6 346 aa12.59□□□□□ -0.39
C9orf3-218ENST00000482056 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
C9orf3-218ENST00000482056 RPL19P84098 196 aaKnown RBP12.58□□□□□ -0.4
C9orf3-218ENST00000482056 IQCJQ1A5X6 159 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 OR5B3Q8NH48 314 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 LRFN3Q9BTN0 628 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 GAL3ST2Q9H3Q3 398 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
C9orf3-218ENST00000482056 IL36BQ9NZH7 164 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 SVILO95425 2214 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 APOA2P02652 100 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 HNF1AP20823 631 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 TAS2R45P59539 299 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 YPEL3P61236 119 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-218ENST00000482056 C2orf83Q53S99 150 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 DUX4L9Q6RFH8 374 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-218ENST00000482056 Q6ZS92 163 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 FAM216BQ8N7L0 139 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 BET1LQ9NYM9 111 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
C9orf3-218ENST00000482056 LINC00869P0C866 280 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 PAX1P15863 534 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 CD40P25942 277 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 NUP37Q8NFH4 326 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 NABP2Q9BQ15 211 aa12.57□□□□□ -0.4
C9orf3-218ENST00000482056 FOXH1O75593 365 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 ACTL6BO94805 426 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 NDUFB7P17568 137 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-218ENST00000482056 PSG5Q15238 335 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 MIR17HGQ75NE6 70 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 PNKDQ8N490 385 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 RPRMLQ8N4K4 120 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 OSR1Q8TAX0 266 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-218ENST00000482056 CADP27708 2225 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 MEF2CQ06413 473 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-218ENST00000482056 RPEL1Q2QD12 228 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 KRTCAP3Q53RY4 240 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
C9orf3-218ENST00000482056 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-218ENST00000482056 MYOD1P15172 320 aa12.55□□□□□ -0.4
C9orf3-218ENST00000482056 GNG4P50150 75 aa12.55□□□□□ -0.4
C9orf3-218ENST00000482056 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-218ENST00000482056 FAM57AQ8TBR7 257 aa12.55□□□□□ -0.4
C9orf3-218ENST00000482056 RNF2Q99496 336 aa12.55□□□□□ -0.4
C9orf3-218ENST00000482056 HELTA6NFD8 242 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 K7EN84 100 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 SAA1P0DJI8 122 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-218ENST00000482056 OR10J1P30954 320 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 ADMP35318 185 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 ERVFC1-1P60608 527 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 FAM27E3Q08E93 113 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 SSX2Q16385 188 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 PRSS8Q16651 343 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 ZNF833PQ6ZTB9 187 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms