RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 PRB1P04280 392 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 IGKV1-16P04430 117 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 LOXP28300 417 aaPredicted RBP11.82□□□□□ -0.52
CHD3-211ENST00000481999 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
CHD3-211ENST00000481999 ELOA3CA0A087WX78 387 aaPredicted RBP11.81□□□□□ -0.52
CHD3-211ENST00000481999 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 ADIRFQ15847 76 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 SPNS3Q6ZMD2 512 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 B9A039 149 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 MDKP21741 143 aaPredicted RBP11.81□□□□□ -0.52
CHD3-211ENST00000481999 GNLYP22749 145 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 ZNF672Q499Z4 452 aaPredicted RBP11.81□□□□□ -0.52
CHD3-211ENST00000481999 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
CHD3-211ENST00000481999 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 VSTM5A8MXK1 200 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 TNFRSF13BO14836 293 aaPredicted RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 SOD3P08294 240 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 BSXQ3C1V8 233 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 DDB2Q92466 427 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 SSX3Q99909 188 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 ZMAT5Q9UDW3 170 aaKnown RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
CHD3-211ENST00000481999 hADV38S2A0JD32 116 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 TRGC1P0CF51 173 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 FRZBQ92765 325 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 S1PR3Q99500 378 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 LINC00312Q9Y6C7 94 aa11.8□□□□□ -0.52
CHD3-211ENST00000481999 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
CHD3-211ENST00000481999 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 SOX15O60248 233 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 HPRT1P00492 218 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 EFNB3Q15768 340 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
CHD3-211ENST00000481999 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 PARLQ9H300 379 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 IGHV2-70P01814 119 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 RPL23P62829 140 aaKnown RBP11.79□□□□□ -0.52
CHD3-211ENST00000481999 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
CHD3-211ENST00000481999 WDR83OSQ9Y284 106 aa11.79□□□□□ -0.52
CHD3-211ENST00000481999 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.529e-6■■□□□ 11.7
CHD3-211ENST00000481999 NDUFB3O43676 98 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 DEFA4P12838 97 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 HIST3H2BBQ8N257 126 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 OR10A7Q8NGE5 316 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 SMCO3A2RU48 225 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 SRRM4A7MD48 611 aaKnown RBP11.78□□□□□ -0.52
CHD3-211ENST00000481999 C19orf84I3L1E1 186 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 PHOX2AO14813 284 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 NDUFS7O75251 213 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CT45A6P0DMU7 189 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CT45A5P0DMU8 189 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CT45A7P0DMV0 189 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CD1BP29016 333 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
CHD3-211ENST00000481999 SPCS3P61009 180 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 PYY3Q5JQD4 70 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 SLC25A48Q6ZT89 311 aaKnown RBP11.78□□□□□ -0.52
CHD3-211ENST00000481999 SSX8Q7RTT4 187 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 C16orf82Q7Z2V1 217 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 CORO2AQ92828 525 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 NEIL1Q96FI4 390 aaPredicted RBP11.78□□□□□ -0.52
CHD3-211ENST00000481999 DMRT1Q9Y5R6 373 aa11.78□□□□□ -0.52
CHD3-211ENST00000481999 ZNF462Q96JM2 2506 aa11.77□□□□□ -0.52
CHD3-211ENST00000481999 H7BYZ3 331 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 PFN1P07737 140 aaKnown RBP11.77□□□□□ -0.53
CHD3-211ENST00000481999 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 OR52E5Q8NH55 327 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 OR4A16Q8NH70 328 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 GATAD1Q8WUU5 269 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 RHOVQ96L33 236 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 OR5B12Q96R08 314 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 PYGO2Q9BRQ0 406 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 SRD5A3Q9H8P0 318 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 PAGE4O60829 102 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 MPDU1O75352 247 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 RAB7AP51149 207 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 ERVK-16P61578 105 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
CHD3-211ENST00000481999 MRPL20Q9BYC9 149 aaKnown RBP11.77□□□□□ -0.53
CHD3-211ENST00000481999 VENTXO95231 258 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 GFI1BQ5VTD9 330 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 C11orf42Q8N5U0 333 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 IFNA10P01566 189 aa11.76□□□□□ -0.53
CHD3-211ENST00000481999 RELBQ01201 579 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms