RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MUC3AQ02505 3323 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 MOB3BQ86TA1 216 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 CHODLQ9H9P2 273 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 TMEM140Q9NV12 185 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 SPINT2O43291 252 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 LYZL6O75951 148 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 ERASQ7Z444 233 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 GCNT2Q8N0V5 402 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 LSM4Q9Y4Z0 139 aaKnown RBP17.1■□□□□ 0.33
COL13A1-208ENST00000479733 OR7C2O60412 319 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 RELBQ01201 579 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 TIGITQ495A1 244 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 ACP7Q6ZNF0 438 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 C11orf53Q8IXP5 236 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 TCTEX1D1Q8N7M0 179 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 TSKUQ8WUA8 353 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 CDC42EP3Q9UKI2 254 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 MED13Q9UHV7 2174 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 TRBV9A0A0B4J1U6 114 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 CA2P00918 260 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 PRRX1P54821 245 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 MRPL49Q13405 166 aaKnown RBP17.09■□□□□ 0.33
COL13A1-208ENST00000479733 WDR73Q6P4I2 378 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 C11orf52Q96A22 123 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 TNCP24821 2201 aa17.09■□□□□ 0.33
COL13A1-208ENST00000479733 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.33
COL13A1-208ENST00000479733 KLF14Q8TD94 323 aaPredicted RBP17.08■□□□□ 0.33
COL13A1-208ENST00000479733 OR10J3Q5JRS4 329 aa17.08■□□□□ 0.32
COL13A1-208ENST00000479733 UTF1Q5T230 341 aa17.08■□□□□ 0.32
COL13A1-208ENST00000479733 CLEC7AQ9BXN2 247 aa17.08■□□□□ 0.32
COL13A1-208ENST00000479733 ASPMQ8IZT6 3477 aa17.08■□□□□ 0.32
COL13A1-208ENST00000479733 ZFHX4Q86UP3 3567 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 SSPNQ14714 243 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 HES4Q9HCC6 221 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 SLC35D1Q9NTN3 355 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 NPY1RP25929 384 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 FABP6P51161 128 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 Q56UQ5 140 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 WDR31Q8NA23 367 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 FAM168AQ92567 244 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 S1PR3Q99500 378 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 PLEKHA3Q9HB20 300 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 IL19Q9UHD0 177 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 SVILO95425 2214 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 PCSK5Q92824 1860 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 APCSP02743 223 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 MT-ND6P03923 174 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 TSPOP30536 169 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 ZNF134P52741 427 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 RPL19P84098 196 aaKnown RBP17.07■□□□□ 0.32
COL13A1-208ENST00000479733 SLAQ13239 276 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 RAB31Q13636 194 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 IBA57Q5T440 356 aaKnown RBP17.07■□□□□ 0.32
COL13A1-208ENST00000479733 LINC00479Q96M42 142 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 TP73-AS1Q9UF72 201 aa17.07■□□□□ 0.32
COL13A1-208ENST00000479733 AGFG2O95081 481 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 LEMD1Q68G75 181 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 ZNF439Q8NDP4 499 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 PILRBQ9UKJ0 227 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 USF1P22415 310 aaPredicted RBP17.06■□□□□ 0.32
COL13A1-208ENST00000479733 TMPRSS3P57727 454 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 STUMQ69YW2 141 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 C6orf15Q6UXA7 325 aaPredicted RBP17.06■□□□□ 0.32
COL13A1-208ENST00000479733 WDR82Q6UXN9 313 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 SLC24A4Q8NFF2 622 aa17.06■□□□□ 0.32
COL13A1-208ENST00000479733 AMY1AP04745 511 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 SP1P08047 785 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 ARG2P78540 354 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 ICE1Q9Y2F5 2266 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 C15orf65H3BRN8 121 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 WISP2O76076 250 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 C1orf229Q6ZS94 237 aaPredicted RBP17.05■□□□□ 0.32
COL13A1-208ENST00000479733 KLHDC1Q8N7A1 406 aa17.05■□□□□ 0.32
COL13A1-208ENST00000479733 IQCF6A8MYZ5 107 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 GGTLC3B5MD39 225 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 TNXAQ16473 311 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 MORN2Q502X0 79 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 CD177Q8N6Q3 437 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 NABP2Q9BQ15 211 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 ENY2Q9NPA8 101 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 LY96Q9Y6Y9 160 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 AREGP15514 252 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 GPR6P46095 362 aaPredicted RBP17.04■□□□□ 0.32
COL13A1-208ENST00000479733 RBX1P62877 108 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 MLANAQ16655 118 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 RNF151Q2KHN1 245 aa17.04■□□□□ 0.32
COL13A1-208ENST00000479733 ZNF331Q9NQX6 463 aaPredicted RBP17.04■□□□□ 0.32
COL13A1-208ENST00000479733 TMEM105Q8N8V8 129 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 ST6GALNAC6Q969X2 333 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 TIMM8AO60220 97 aaPredicted RBP17.03■□□□□ 0.32
COL13A1-208ENST00000479733 GABRA6Q16445 453 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 ORAOV1Q8WV07 137 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 SAA2-SAA4A0A096LPE2 208 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 HSBP1O75506 76 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 HLA-DQA1P01909 254 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 LINC00869P0C866 280 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 FAM214BQ7L5A3 538 aa17.03■□□□□ 0.32
COL13A1-208ENST00000479733 MAFAQ8NHW3 353 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms