RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 IDNKQ5T6J7 187 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 LAMTOR1Q6IAA8 161 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 SLC25A24Q6NUK1 477 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 Q6ZWC4 215 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 WFDC3Q8IUB2 231 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 GDPD1Q8N9F7 314 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 OR10W1Q8NGF6 305 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 CD300LFQ8TDQ1 290 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 IGHV3-21A0A0B4J1V1 117 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 UBE2CO00762 179 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 TSPAN4O14817 238 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 OR13C7P0DN81 318 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 SCAND1P57086 179 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
VCL-205ENST00000478896 SPARTQ8N0X7 666 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 STPG3Q8N7X2 389 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 OR5H6Q8NGV6 325 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 VN1R17PQ8TDU5 208 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 BORCS5Q969J3 196 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 SLC25A38Q96DW6 304 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 BSCL2Q96G97 398 aaPredicted RBP9.85□□□□□ -0.83
VCL-205ENST00000478896 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 PLEKHA2Q9HB19 425 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 IFT46Q9NQC8 304 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 DIABLOQ9NR28 239 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 COMMD9Q9P000 198 aa9.85□□□□□ -0.83
VCL-205ENST00000478896 KLK5Q9Y337 293 aaPredicted RBP9.85□□□□□ -0.83
VCL-205ENST00000478896 IGHV3OR16-8A0A075B7F1 116 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 A0A0A6YYH2 397 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 LOC100506127A0A0U1RQW1 187 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 MEIS3P1A6NDR6 274 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 OR4C46A6NHA9 309 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 A6NJ64 397 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 FGF2P09038 288 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 CLEC2LP0C7M8 214 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 TRAPPC2P0DI81 140 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 TRAPPC2BP0DI82 140 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 RPL35AP18077 110 aaKnown RBP9.84□□□□□ -0.83
VCL-205ENST00000478896 CBX5P45973 191 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 EWSR1Q01844 656 aaKnown RBP eCLIP9.84□□□□□ -0.83
VCL-205ENST00000478896 Q56UQ5 140 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 CEMP1Q6PRD7 247 aaPredicted RBP9.84□□□□□ -0.83
VCL-205ENST00000478896 TMEM217Q8N7C4 229 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 TSPAN14Q8NG11 270 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 OR5AP2Q8NGF4 316 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 LSM10Q969L4 123 aaKnown RBP9.84□□□□□ -0.83
VCL-205ENST00000478896 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 EHFQ9NZC4 300 aa9.84□□□□□ -0.83
VCL-205ENST00000478896 KIR2DL5BA0A0G2JN68 375 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 KIR2DL5BA0A0G2JPC4 375 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 NDUFA4O00483 81 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 ZNF207O43670 478 aaKnown RBP9.83□□□□□ -0.84
VCL-205ENST00000478896 RLN1P04808 185 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 SERPINE2P07093 398 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 WT1-ASQ06250 92 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 SPSB3Q6PJ21 355 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 ZNF773Q6PK81 442 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 KIR2DL5AQ8N109 375 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 KIR2DL5BQ8NHK3 375 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 GIMAP1Q8WWP7 306 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 C6orf62Q9GZU0 229 aaPredicted RBP9.83□□□□□ -0.84
VCL-205ENST00000478896 RNF167Q9H6Y7 350 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 AUNIPQ9H7T9 357 aa9.83□□□□□ -0.84
VCL-205ENST00000478896 TEX50A0A1B0GTY4 177 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 SNAPC5O75971 98 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 OR5B3Q8NH48 314 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 SCARB1Q8WTV0 552 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 RNF183Q96D59 192 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 GALNT14Q96FL9 552 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 ZNF2Q9BSG1 426 aaPredicted RBP9.82□□□□□ -0.84
VCL-205ENST00000478896 CHRDL1Q9BU40 450 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 Q9H521 79 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 OR51B2Q9Y5P1 312 aa9.82□□□□□ -0.84
VCL-205ENST00000478896 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
VCL-205ENST00000478896 PLECQ15149 4684 aaKnown RBP9.81□□□□□ -0.84
VCL-205ENST00000478896 KRASP01116 189 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
VCL-205ENST00000478896 F2RP25116 425 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 GNRHRP30968 328 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 G6PCP35575 357 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 TMEM56Q96MV1 263 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
VCL-205ENST00000478896 C15orf62A8K5M9 175 aa9.8□□□□□ -0.84
VCL-205ENST00000478896 NUPL2O15504 423 aaKnown RBP9.8□□□□□ -0.84
VCL-205ENST00000478896 YIF1AO95070 293 aa9.8□□□□□ -0.84
VCL-205ENST00000478896 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
VCL-205ENST00000478896 FCGR2BP31994 310 aaPredicted RBP9.8□□□□□ -0.84
VCL-205ENST00000478896 LPAR6P43657 344 aa9.8□□□□□ -0.84
VCL-205ENST00000478896 TFPI2P48307 235 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms