RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZNF502Q8TBZ5 544 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 CACNG8Q8WXS5 425 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 GPHA2Q96T91 129 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 S4R3C0 116 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 LOC102724200A0A096LPH7 203 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 RLN1P04808 185 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 PTHLHP12272 177 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 LAMTOR1Q6IAA8 161 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 LPCAT3Q6P1A2 487 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 DHRS11Q6UWP2 260 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 CADM3Q8N126 398 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 SAMD12Q8N8I0 201 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 OR5B3Q8NH48 314 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 TMEM56Q96MV1 263 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 FAM110AQ9BQ89 295 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 ZNF2Q9BSG1 426 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 RNF167Q9H6Y7 350 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 RETNQ9HD89 108 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 DAZ1Q9NQZ3 744 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 MLXQ9UH92 298 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
SMARCE1-209ENST00000478349 SMIM31A0A1B0GVY4 71 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 GPR31O00270 319 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 TGOLN2O43493 480 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 SCAF4O95104 1147 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 FCER2P06734 321 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 SERPINE2P07093 398 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 GNRHRP30968 328 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 PRSS3P35030 304 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 APOC4P55056 127 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 TMEM190Q8WZ59 177 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 HINT2Q9BX68 163 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 WFDC10AQ9H1F0 79 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 TNCP24821 2201 aa10.85□□□□□ -0.67
SMARCE1-209ENST00000478349 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 TAS2R20P59543 309 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 SLC25A24Q6NUK1 477 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 DGCR14Q96DF8 476 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 ZNF436Q9C0F3 470 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 FAM212BQ9NTI7 297 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 OR51B2Q9Y5P1 312 aa10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 F11RQ9Y624 299 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-209ENST00000478349 A0A087WXM4 84 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 OR4C46A6NHA9 309 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 NDUFA4O00483 81 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 PGLYRP1O75594 196 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 KRASP01116 189 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 RFX2P48378 723 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 TSPAN5P62079 268 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 C6orf62Q9GZU0 229 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 SCPEP1Q9HB40 452 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 ANAPC10Q9UM13 185 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
SMARCE1-209ENST00000478349 TRAV3A0A0B4J244 114 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 TEX50A0A1B0GTY4 177 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 UBE2CO00762 179 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 TSPAN4O14817 238 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 TNFAIP8O95379 198 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 PMP2P02689 132 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 RPA2P15927 270 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 NAT1P18440 290 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 EDN2P20800 178 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 BMI1P35226 326 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 LPAR6P43657 344 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 WT1-ASQ06250 92 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 Q56UQ5 140 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 OR10W1Q8NGF6 305 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 CMTM3Q96MX0 182 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
SMARCE1-209ENST00000478349 IGHV3-35A0A0C4DH35 117 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 HRH1P35367 487 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 G6PCP35575 357 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 Q6ZWC4 215 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 TMEM217Q8N7C4 229 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 UBAC2Q8NBM4 344 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 OR1P1Q8NH06 330 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 C20orf24Q9BUV8 137 aa10.81□□□□□ -0.68
SMARCE1-209ENST00000478349 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms