RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 TRAPPC2P0DI81 140 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 TRAPPC2BP0DI82 140 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 SPNP16150 400 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 MEF2DQ14814 521 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 OR4C16Q8NGL9 310 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 SEC22AQ96IW7 307 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 TP53RKQ96S44 253 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 RSL24D1Q9UHA3 163 aaKnown RBP17.39■□□□□ 0.37
TRAF4-211ENST00000478021 IGLV11-55A0A075B6I3 123 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 FABP12A6NFH5 140 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 DBX1A6NMT0 343 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 DISC1C4P0D8 188 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 SERPINE2P07093 398 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 AKAIN1P0CW23 69 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 HIST1H1BP16401 226 aaKnown RBP17.38■□□□□ 0.37
TRAF4-211ENST00000478021 PTBP1P26599 531 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRAF4-211ENST00000478021 OR9G4Q8NGQ1 327 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 OR6Q1Q8NGQ2 317 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 ZFAND1Q8TCF1 268 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 SOSTQ9BQB4 213 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 SRSF8Q9BRL6 282 aaKnown RBP17.38■□□□□ 0.37
TRAF4-211ENST00000478021 COPZ2Q9P299 210 aa17.38■□□□□ 0.37
TRAF4-211ENST00000478021 H0Y980 276 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 GSTZ1O43708 216 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-211ENST00000478021 OR13C7P0DN81 318 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 WT1-ASQ06250 92 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 THOC7Q6I9Y2 204 aaKnown RBP17.37■□□□□ 0.37
TRAF4-211ENST00000478021 H2BFWTQ7Z2G1 175 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 CCDC140Q96MF4 163 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 NDUFA4L2Q9NRX3 87 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 PRNDQ9UKY0 176 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 DMRT1Q9Y5R6 373 aa17.37■□□□□ 0.37
TRAF4-211ENST00000478021 C3orf85A0A1B0GTC6 90 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 MFSD2BA6NFX1 497 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 C15orf61A6NNL5 157 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 HLA-AP01891 365 aaKnown RBP17.36■□□□□ 0.37
TRAF4-211ENST00000478021 IZUMO4Q1ZYL8 232 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 KLK9Q2XQG4 91 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 SP6Q3SY56 376 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 CLEC19AQ6UXS0 136 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 IL34Q6ZMJ4 242 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 CADM3Q8N126 398 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 CCDC71LQ8N9Z2 235 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 EEF1AKMT3Q96AZ1 226 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 TSC22D3Q99576 134 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 KLK9Q9UKQ9 250 aa17.36■□□□□ 0.37
TRAF4-211ENST00000478021 ANKRD20A5PA0PJZ0 165 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 CTSDP07339 412 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-211ENST00000478021 MECP2P51608 486 aaKnown RBP17.35■□□□□ 0.37
TRAF4-211ENST00000478021 TATDN3Q17R31 274 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 GDPD1Q8N9F7 314 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 OR4A16Q8NH70 328 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 LSM10Q969L4 123 aaKnown RBP17.35■□□□□ 0.37
TRAF4-211ENST00000478021 TMEM14BQ9NUH8 114 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 LSM4Q9Y4Z0 139 aaKnown RBP17.35■□□□□ 0.37
TRAF4-211ENST00000478021 SORL1Q92673 2214 aa17.35■□□□□ 0.37
TRAF4-211ENST00000478021 ARL3P36405 182 aa17.34■□□□□ 0.37
TRAF4-211ENST00000478021 DCTN2Q13561 401 aaKnown RBP17.34■□□□□ 0.37
TRAF4-211ENST00000478021 OR51S1Q8NGJ8 323 aa17.34■□□□□ 0.37
TRAF4-211ENST00000478021 OR5B3Q8NH48 314 aa17.34■□□□□ 0.37
TRAF4-211ENST00000478021 FKBP11Q9NYL4 201 aa17.34■□□□□ 0.37
TRAF4-211ENST00000478021 C14orf166Q9Y224 244 aaKnown RBP17.34■□□□□ 0.37
TRAF4-211ENST00000478021 OR2C1O95371 312 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 IGKV1-5P01602 117 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 IGLV1-51P01701 117 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 CSN3P07498 182 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 GP9P14770 177 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 AKR1C2P52895 323 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 CD69Q07108 199 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 TRIM16LQ309B1 348 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 PYDC2Q56P42 97 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 FAM209BQ5JX69 171 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 SLC25A24Q6NUK1 477 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 HSD17B13Q7Z5P4 300 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-211ENST00000478021 RTBDNQ9BSG5 229 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-211ENST00000478021 ZC4H2Q9NQZ6 224 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 V9GYH0 126 aa17.33■□□□□ 0.36
TRAF4-211ENST00000478021 GGCTO75223 188 aaKnown RBP17.32■□□□□ 0.36
TRAF4-211ENST00000478021 S100A5P33763 92 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 MFAP2P55001 183 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 CXorf58Q96LI9 332 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 TMEM56Q96MV1 263 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 PRRT1Q99946 306 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 B9D2Q9BPU9 175 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 THAP7Q9BT49 309 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-211ENST00000478021 C5orf66Q9H5L9 145 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 PEMTQ9UBM1 199 aa17.32■□□□□ 0.36
TRAF4-211ENST00000478021 F11RQ9Y624 299 aaKnown RBP17.32■□□□□ 0.36
TRAF4-211ENST00000478021 IGHV3-21A0A0B4J1V1 117 aa17.31■□□□□ 0.36
TRAF4-211ENST00000478021 MCUBQ9NWR8 336 aa17.31■□□□□ 0.36
TRAF4-211ENST00000478021 THYN1Q9P016 225 aa17.31■□□□□ 0.36
TRAF4-211ENST00000478021 TRBV7-1A0A0A6YYK4 115 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 TEX13DA0A0J9YY54 714 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-211ENST00000478021 ZNF701M0R085 212 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-211ENST00000478021 CYB5BO43169 146 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 OR5AC1P0C628 307 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 EDN2P20800 178 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 UCP1P25874 307 aa17.3■□□□□ 0.36
TRAF4-211ENST00000478021 SURF2Q15527 256 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-211ENST00000478021 SPINK9Q5DT21 86 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms