RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 HARBI1Q96MB7 349 aa9.66□□□□□ -0.86
PRPF39-203ENST00000477626 RSG1Q9BU20 258 aa9.66□□□□□ -0.86
PRPF39-203ENST00000477626 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
PRPF39-203ENST00000477626 TBL2Q9Y4P3 447 aaKnown RBP9.66□□□□□ -0.86
PRPF39-203ENST00000477626 HELZ2Q9BYK8 2649 aaKnown RBP9.66□□□□□ -0.86
PRPF39-203ENST00000477626 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 NDUFS6O75380 124 aaKnown RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 DFFBO76075 338 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 COX6B1P14854 86 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 ARF6P62330 175 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 PRR20EP86478 221 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 PRR20CP86479 221 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 PRR20DP86480 221 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 PRR20BP86481 221 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 PRR20AP86496 221 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 TMEM217Q8N7C4 229 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 SCAF4O95104 1147 aaKnown RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 EIF5AP63241 154 aaKnown RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 SPANXN5Q5MJ07 72 aa9.65□□□□□ -0.86
PRPF39-203ENST00000477626 MS4A7Q9GZW8 240 aaPredicted RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
PRPF39-203ENST00000477626 CA2P00918 260 aa9.65□□□□□ -0.87
PRPF39-203ENST00000477626 LINC00869P0C866 280 aa9.65□□□□□ -0.87
PRPF39-203ENST00000477626 MAS1LP35410 378 aa9.65□□□□□ -0.87
PRPF39-203ENST00000477626 DVL1P1P54792 670 aaPredicted RBP9.65□□□□□ -0.87
PRPF39-203ENST00000477626 TMEM147Q9BVK8 224 aa9.65□□□□□ -0.87
PRPF39-203ENST00000477626 AMMECR1Q9Y4X0 333 aaPredicted RBP9.65□□□□□ -0.87
PRPF39-203ENST00000477626 UMAD1C9J7I0 102 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 TIMM23O14925 209 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 VAMP2P63027 116 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 STX12Q86Y82 276 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
PRPF39-203ENST00000477626 SUN5Q8TC36 379 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 GNPNAT1Q96EK6 184 aaPredicted RBP9.64□□□□□ -0.87
PRPF39-203ENST00000477626 ONECUT1Q9UBC0 465 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 TEX46H3BTG2 121 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 RPL8P62917 257 aaKnown RBP9.64□□□□□ -0.87
PRPF39-203ENST00000477626 SERF2P84101 59 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 LRRC75A-AS1Q8N1F1 130 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 BPIFCQ8NFQ6 507 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 OR4A16Q8NH70 328 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 FNDC4Q9H6D8 234 aaPredicted RBP9.64□□□□□ -0.87
PRPF39-203ENST00000477626 SIRT7Q9NRC8 400 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 DPM3Q9P2X0 92 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 LCN2P80188 198 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
PRPF39-203ENST00000477626 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
PRPF39-203ENST00000477626 FCN1O00602 326 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 KLF17Q5JT82 389 aaPredicted RBP9.63□□□□□ -0.87
PRPF39-203ENST00000477626 C10orf55Q5SWW7 151 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 SLC24A4Q8NFF2 622 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
PRPF39-203ENST00000477626 RPRMQ9NS64 109 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 FKBP11Q9NYL4 201 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 ZNF705EA8MWA4 302 aaPredicted RBP9.63□□□□□ -0.87
PRPF39-203ENST00000477626 APOA2P02652 100 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 ERVK-16P61578 105 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 Q6ZRG5 221 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 THAP8Q8NA92 274 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 MEGF9Q9H1U4 602 aa9.63□□□□□ -0.87
PRPF39-203ENST00000477626 ANKRD17O75179 2603 aaKnown RBP9.63□□□□□ -0.87
PRPF39-203ENST00000477626 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 P2RX4Q99571 388 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 MAP1AP78559 2803 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-203ENST00000477626 AVPP01185 164 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 AMY1AP04745 511 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 HBG1P69891 147 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 HBG2P69892 147 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 FAM168AQ92567 244 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 PINX1Q96BK5 328 aaKnown RBP9.62□□□□□ -0.87
PRPF39-203ENST00000477626 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-203ENST00000477626 IL3RAP26951 378 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 HTR1DP28221 377 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 CAMLGP49069 296 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-203ENST00000477626 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 NARFLQ9H6Q4 476 aa9.62□□□□□ -0.87
PRPF39-203ENST00000477626 COX7A1P24310 79 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 PAX6P26367 422 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 OPRK1P41145 380 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 NDPQ00604 133 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 COMMD1Q8N668 190 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 VSTM2AQ8TAG5 236 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 EAF1Q96JC9 268 aaPredicted RBP9.61□□□□□ -0.87
PRPF39-203ENST00000477626 PIMREGQ9BSJ6 248 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 TMEM218A2RU14 115 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 DSCR9P59020 149 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 RAB14P61106 215 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 GAMTQ14353 236 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 TMEM41BQ5BJD5 291 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 MALSU1Q96EH3 234 aa9.61□□□□□ -0.87
PRPF39-203ENST00000477626 RCC1LQ96I51 464 aaKnown RBP9.61□□□□□ -0.87
PRPF39-203ENST00000477626 IGHV3-72A0A0B4J1Y9 119 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms