RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GON7Q9BXV9 100 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 SHOXO15266 292 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 S1PR2O95136 353 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 LGALS7P47929 136 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 FXYD3Q14802 87 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 PRR13Q9NZ81 148 aa13.69□□□□□ -0.22
PTPN7-209ENST00000477554 I3L521 148 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 RBMXL2O75526 392 aaKnown RBP13.68□□□□□ -0.22
PTPN7-209ENST00000477554 SPDEFO95238 335 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 MYCNOSP40205 109 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 ERVK-16P61578 105 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 LHFPL5Q8TAF8 219 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 ARPC1AQ92747 370 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 RRNAD1Q96FB5 475 aaKnown RBP13.68□□□□□ -0.22
PTPN7-209ENST00000477554 MED28Q9H204 178 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 TMED3Q9Y3Q3 217 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
PTPN7-209ENST00000477554 DBX1A6NMT0 343 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 MARCH11A6NNE9 402 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 IFNA21P01568 189 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 IGKV1-39P01597 117 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 IGKV1D-39P04432 117 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 AKR1C2P52895 323 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 FAM219AQ8IW50 185 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 SLC35G3Q8N808 338 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 DMBX1Q8NFW5 382 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 OR5T1Q8NG75 326 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 OR11H1Q8NG94 326 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 RNASE11Q8TAA1 199 aaKnown RBP13.67□□□□□ -0.22
PTPN7-209ENST00000477554 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
PTPN7-209ENST00000477554 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-209ENST00000477554 KRASP01116 189 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 SAA1P0DJI8 122 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-209ENST00000477554 MYOD1P15172 320 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-209ENST00000477554 FHL3Q13643 280 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 C19orf35Q6ZS72 473 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 LYZL2Q7Z4W2 148 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 CADM3Q8N126 398 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 LSM10Q969L4 123 aaKnown RBP13.66□□□□□ -0.22
PTPN7-209ENST00000477554 RHOVQ96L33 236 aa13.66□□□□□ -0.22
PTPN7-209ENST00000477554 WI2-2373I1.2A0A1W2PRP0 233 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 HOXB5P09067 269 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 G6PCP35575 357 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 TMEM65Q6PI78 240 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 H2BFWTQ7Z2G1 175 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 RCC1LQ96I51 464 aaKnown RBP13.65□□□□□ -0.22
PTPN7-209ENST00000477554 UBE2E2Q96LR5 201 aa13.65□□□□□ -0.22
PTPN7-209ENST00000477554 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-209ENST00000477554 A0A1B0GW64 132 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 E7EUB6 86 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 K7EIL1 84 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 HLA-GP17693 338 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 UBE2KP61086 200 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 PRSS8Q16651 343 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 AKIRIN2Q53H80 203 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 hCG_2014768A0A024R1R8 64 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 IGHV4OR15-8A0A075B7B6 117 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 A0A087WW49 117 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 A0A1B0GVG6 124 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 ADAP1O75689 374 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 CNIH1O95406 144 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 IGKV1-5P01602 117 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 SLURP1P55000 103 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 TNXAQ16473 311 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 SPIN2AQ99865 258 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 SPIN2BQ9BPZ2 258 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 BET1LQ9NYM9 111 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 MGAT4CQ9UBM8 478 aa13.64□□□□□ -0.23
PTPN7-209ENST00000477554 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 GOSR2O14653 212 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 OR2A4O95047 310 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 PRH1P02810 166 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 SULT1A3P0DMM9 295 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 SULT1A4P0DMN0 295 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 SLC25A6P12236 298 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 TPPP2P59282 170 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 EGFEM1PQ0D2K5 195 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 NMSQ5H8A3 153 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 GSG1LQ6UXU4 331 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
PTPN7-209ENST00000477554 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 OR2A7Q96R45 310 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 TMEM140Q9NV12 185 aa13.63□□□□□ -0.23
PTPN7-209ENST00000477554 A0A1B0GU03 582 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 C5orf51A6NDU8 294 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 HMX3A6NHT5 357 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms