RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ANAPC10Q9UM13 185 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 S4R3C0 116 aa9.19□□□□□ -0.94
COL27A1-204ENST00000477421 MYO18BQ8IUG5 2567 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 MUC22E2RYF6 1773 aaPredicted RBP9.18□□□□□ -0.94
COL27A1-204ENST00000477421 KBTBD11-OT1A0A1B0GTJ5 212 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 GRIFINA4D1Z8 144 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 GATCO43716 136 aaKnown RBP9.18□□□□□ -0.94
COL27A1-204ENST00000477421 WT1P19544 449 aaPredicted RBP9.18□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF585BQ52M93 769 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 PDPNQ86YL7 162 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 C1orf162Q8NEQ5 155 aaPredicted RBP9.18□□□□□ -0.94
COL27A1-204ENST00000477421 RAB1CQ92928 201 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 K7EQM0 130 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 CEACAM1P13688 526 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 DUTP33316 252 aaKnown RBP9.18□□□□□ -0.94
COL27A1-204ENST00000477421 FAM90A1Q86YD7 464 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 DOLPP1Q86YN1 238 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 OR8I2Q8N0Y5 310 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 NABP2Q9BQ15 211 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 PITPNC1Q9UKF7 332 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 SLC17A3O00476 420 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 CGAP01215 116 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 CSN3P07498 182 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 AGAP20933 346 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 FAM222BQ8WU58 562 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 IL19Q9UHD0 177 aa9.18□□□□□ -0.94
COL27A1-204ENST00000477421 MOSP00540 346 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 C1orf174Q8IYL3 243 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 SNRNP40Q96DI7 357 aaKnown RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 WDFY4Q6ZS81 3184 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 LAMA1P25391 3075 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 MPDU1O75352 247 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 RNASEKQ6P5S7 137 aaKnown RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 LHFPL4Q7Z7J7 247 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 WDR31Q8NA23 367 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 P2RX4Q99571 388 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 RAB1BQ9H0U4 201 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 SPEGQ15772 3267 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 A0A087X0M5 115 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 A0A1B0GX30 115 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 SLC31A2O15432 143 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 LYL1P12980 280 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 CD24P25063 80 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 RPL27AP46776 148 aaKnown RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 CSN1S1P47710 185 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 C10orf55Q5SWW7 151 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF474Q6S9Z5 364 aaPredicted RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 OR1L6Q8NGR2 347 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 OR2T6Q8NHC8 308 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 ELOVL1Q9BW60 279 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 SSBP3Q9BWW4 388 aaPredicted RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
COL27A1-204ENST00000477421 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 PLXNB1O43157 2135 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
COL27A1-204ENST00000477421 SCO2A0A1W2PP80 73 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 SRRM5B3KS81 715 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF137PP52743 207 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 MFAP2P55001 183 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 SSC4DQ8WTU2 575 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 TMSB15BA0A087X1C1 80 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 CXCL1P09341 107 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 Q6ZR03 302 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 OR8B3Q8NGG8 313 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 OR8B2Q96RD0 313 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 UBTD1Q9HAC8 227 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 ZNF729A6NN14 1252 aaPredicted RBP9.16□□□□□ -0.94
COL27A1-204ENST00000477421 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
COL27A1-204ENST00000477421 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 CLEC3BP05452 202 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 TPPP2P59282 170 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 OR5I1Q13606 314 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 OR10W1Q8NGF6 305 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
COL27A1-204ENST00000477421 METTL1Q9UBP6 276 aaKnown RBP9.16□□□□□ -0.94
COL27A1-204ENST00000477421 IGKV3-7A0A075B6H7 116 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IGKV1D-17A0A075B6S4 117 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IGHV1-69-2A0A0G2JMI3 117 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 GNG7O60262 68 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 CBLN1P23435 193 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 GCHFRP30047 84 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 IL15RAQ13261 267 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 CLEC2AQ6UVW9 174 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 S100A7AQ86SG5 101 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 MUC15Q8N387 334 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 FAM57AQ8TBR7 257 aa9.15□□□□□ -0.94
COL27A1-204ENST00000477421 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms