RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PLXNB3Q9ULL4 1909 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 MBD3L5A6NJ08 208 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 SLC25A5P05141 298 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 GYPBP06028 91 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 FCGR2AP12318 317 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 ORM2P19652 201 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 FCGR2BP31994 310 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 PRDX2P32119 198 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 INSL3P51460 131 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 DYNLT3P51808 116 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 DLX6P56179 175 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR1D5P58170 312 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 RPL27P61353 136 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 EDDM3AQ14507 147 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 IHHQ14623 411 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 MLF2Q15773 248 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 FAM69BQ5VUD6 431 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 RASL11AQ6T310 242 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PARM1Q6UWI2 310 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PIANPQ8IYJ0 282 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TMEM52Q8NDY8 209 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR4X2Q8NGF9 303 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR10G8Q8NGN5 311 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR1F12Q8NHA8 337 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 GTSF1Q8WW33 167 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR5P2Q8WZ92 322 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 BADQ92934 168 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 ABHD14BQ96IU4 210 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 HSD17B10Q99714 261 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 VKORC1Q9BQB6 163 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 C11orf1Q9H5F2 150 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 WDR76Q9H967 626 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PELI2Q9HAT8 420 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 RABAC1Q9UI14 185 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR2W1Q9Y3N9 320 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 HILPDAQ9Y5L2 63 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 R4GN57 208 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 X6R8D5 127 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TRBV20-1A0A075B6N2 111 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TRAV24A0A0B4J272 114 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 A0A1W2PPI3 338 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 CRYM-AS1A6NIL9 109 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 K7EN84 100 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 NTN1O95631 604 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 CXCL8P10145 99 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 RBM11P57052 281 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 RPS4XP62701 263 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 CX3CL1P78423 397 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 SERF2P84101 59 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TNFAIP6P98066 277 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 ZNF141Q15928 474 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 ZNF726P1Q15940 193 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 CR1LQ2VPA4 569 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 MS4A13Q5J8X5 152 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR4C11Q6IEV9 310 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TMEM64Q6YI46 380 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 FAM57BQ71RH2 274 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 C1QL2Q7Z5L3 287 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 HMGN2P46Q86SG4 172 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PPP1R27Q86WC6 154 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TMEM252Q8N6L7 170 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR10AC1Q8NH08 325 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 WIPF2Q8TF74 440 aaPredicted RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 TMEM255BQ8WV15 326 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 RPEQ96AT9 228 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 LINC01587Q99440 93 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PRADC1Q9BSG0 188 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 OR2H1Q9GZK4 316 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 DEFB129Q9H1M3 183 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 TECRQ9NZ01 308 aaKnown RBP3.45□□□□□ -1.86
CD55-208ENST00000476590 DHDHQ9UQ10 334 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 PIGLQ9Y2B2 252 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 V9GYY9 64 aa3.45□□□□□ -1.86
CD55-208ENST00000476590 NUP210Q8TEM1 1887 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 MYO16Q9Y6X6 1858 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 GREB1Q4ZG55 1949 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 CCL15-CCL14A0A0B4J2E2 113 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 TINCRA0A1B0GVN0 87 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 FAM90A10PA6NDY2 464 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 OTOL1A6NHN0 477 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 H3BMG7 143 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 NPFFO15130 113 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 TIMM8AO60220 97 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 OR2H2O95918 312 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 HLA-DQA1P01909 254 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 PIRTP0C851 137 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 MYOD1P15172 320 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 HOXD9P28356 352 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 BLVRBP30043 206 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 MRPS6P82932 125 aaKnown RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 NMSQ5H8A3 153 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 C1orf100Q5SVJ3 147 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 IBA57Q5T440 356 aaKnown RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 OTPQ5XKR4 325 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 SLC25A47Q6Q0C1 308 aa3.44□□□□□ -1.86
CD55-208ENST00000476590 DUX4L9Q6RFH8 374 aaPredicted RBP3.44□□□□□ -1.86
CD55-208ENST00000476590 ACP7Q6ZNF0 438 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms