RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CATR1Q13166 79 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 RBPMS2Q6ZRY4 209 aaKnown RBP9.72□□□□□ -0.85
MRPL55-228ENST00000476267 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 GIMAP1Q8WWP7 306 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 FCGR1BQ92637 280 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
MRPL55-228ENST00000476267 SLC5A7Q9GZV3 580 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 AUNIPQ9H7T9 357 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 COMMD9Q9P000 198 aa9.72□□□□□ -0.85
MRPL55-228ENST00000476267 NUPR2A6NF83 97 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 GNRHRP30968 328 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 THOC7Q6I9Y2 204 aaKnown RBP9.71□□□□□ -0.86
MRPL55-228ENST00000476267 PLET1Q6UQ28 207 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 OR5AP2Q8NGF4 316 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 COMMD5Q9GZQ3 224 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
MRPL55-228ENST00000476267 NDUFA4L2Q9NRX3 87 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 THYN1Q9P016 225 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 UBQLN2Q9UHD9 624 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 SSR3Q9UNL2 185 aa9.71□□□□□ -0.86
MRPL55-228ENST00000476267 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 KIR2DL5BA0A0G2JN68 375 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 KIR2DL5BA0A0G2JPC4 375 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 OR2T8A6NH00 312 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 SPRY2O43597 315 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 BMI1P35226 326 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 ADMP35318 185 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 APOC4P55056 127 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 FXYD4P59646 89 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 MXD1Q05195 221 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 HSD17B13Q7Z5P4 300 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-228ENST00000476267 KIR2DL5AQ8N109 375 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 CADM3Q8N126 398 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 OR51H1Q8NH63 302 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 CD300LFQ8TDQ1 290 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 RNF183Q96D59 192 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 BSCL2Q96G97 398 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-228ENST00000476267 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 ANAPC10Q9UM13 185 aa9.7□□□□□ -0.86
MRPL55-228ENST00000476267 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
MRPL55-228ENST00000476267 CXorf65A6NEN9 183 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 MARCH11A6NNE9 402 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 K7EIM0 57 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 NDUFA4O00483 81 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 UBE2CO00762 179 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 LY6G6CO95867 125 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 FCER2P06734 321 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 TRAPPC2P0DI81 140 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 TRAPPC2BP0DI82 140 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 OR13C7P0DN81 318 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 IDNKQ5T6J7 187 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 SPSB3Q6PJ21 355 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
MRPL55-228ENST00000476267 DHRS11Q6UWP2 260 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 TMEM17Q86X19 198 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
MRPL55-228ENST00000476267 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 K7EMT4 169 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 RPA2P15927 270 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 F2RP25116 425 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 CBX5P45973 191 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 AADACL3Q5VUY0 350 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 MOB3AQ96BX8 217 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 MAP6D1Q9H9H5 199 aa9.68□□□□□ -0.86
MRPL55-228ENST00000476267 MEIS3P1A6NDR6 274 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 DBX1A6NMT0 343 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 C15orf62A8K5M9 175 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 PGLYRP1O75594 196 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-228ENST00000476267 RLN1P04808 185 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 NAT1P18440 290 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 OR1L8Q8NGR8 309 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 FCAMRQ8WWV6 532 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
MRPL55-228ENST00000476267 YTHDF1Q9BYJ9 559 aaKnown RBP9.67□□□□□ -0.86
MRPL55-228ENST00000476267 FXYD6Q9H0Q3 95 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 C21orf62Q9NYP8 219 aa9.67□□□□□ -0.86
MRPL55-228ENST00000476267 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 IGHV3-21A0A0B4J1V1 117 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 CYB5BO43169 146 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 XRCC3O43542 346 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 TMEM127O75204 238 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-228ENST00000476267 CTSGP08311 255 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 FCGR2BP31994 310 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-228ENST00000476267 RFX2P48378 723 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 HERV-K104P61576 105 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 LAMTOR1Q6IAA8 161 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 BORCS5Q969J3 196 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 GALNT14Q96FL9 552 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 OR10C1Q96KK4 312 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms