RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 IGLV10-54A0A075B6I4 117 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 IGLV3-32A0A0A0MS00 114 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 IGHV3-43A0A0B4J1X8 118 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 C17orf51A8MQB3 221 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 EEF1E1-BLOC1S5C9J1V9 151 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 GOLGA8RI6L899 631 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 GYG2O15488 501 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 EEF1E1O43324 174 aaKnown RBP2.15□□□□□ -2.07
PTCD3-211ENST00000476215 PSMG1O95456 288 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 IGKV1D-33P01593 117 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 IGKV1-33P01594 117 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 PTNP21246 168 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 IL12BP29460 328 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 GABRA3P34903 492 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 CD79BP40259 229 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 DSCR4P56555 118 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-211ENST00000476215 NAA20P61599 178 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 BNIP2Q12982 314 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 ZNHIT3Q15649 155 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-211ENST00000476215 NNATQ16517 81 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 CEACAM16Q2WEN9 425 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 DEFB113Q30KQ7 82 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 CCDC153Q494R4 210 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 Q6ZQT7 251 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 MARCH3Q86UD3 253 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 FAM9CQ8IZT9 166 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 OR2M3Q8NG83 312 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 OR4K17Q8NGC6 315 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 OR6K3Q8NGY3 331 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 MITD1Q8WV92 249 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 CACNG8Q8WXS5 425 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 RMND5BQ96G75 393 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-211ENST00000476215 HBEGFQ99075 208 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 GABARAPL1Q9H0R8 117 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 RHOFQ9HBH0 211 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 DNAJC27Q9NZQ0 273 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 VAPAQ9P0L0 249 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 STK38LQ9Y2H1 464 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 KIAA1549Q9HCM3 1950 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 CUBNO60494 3623 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 FN1P02751 2386 aaKnown RBP2.15□□□□□ -2.07
PTCD3-211ENST00000476215 ALPK2Q86TB3 2170 aa2.15□□□□□ -2.07
PTCD3-211ENST00000476215 USF3Q68DE3 2245 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 A0A0J9YW62 118 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CD300LBA8K4G0 201 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 DEFB108AA8MXU0 73 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 F5H5P2 479 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 H3BQF6 201 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 COPEO14579 308 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 AZIN1O14977 448 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SHBGP04278 402 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 IFI6P09912 130 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 LINC00032P0C843 101 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CRYGSP22914 178 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 LCN1P31025 176 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 EVI2BP34910 448 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 UGT2B10P36537 528 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 ATP5J2P56134 94 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CARD18P57730 90 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 STX5Q13190 355 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 GUSBP1Q15486 140 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 IMPG1Q17R60 797 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 Q499Y3 187 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 ACTBL2Q562R1 376 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CLEC6AQ6EIG7 209 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 DPPA2Q7Z7J5 298 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 GALNT10Q86SR1 603 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 C10orf107Q8IVU9 208 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 FAM58AQ8N1B3 248 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CNEP1R1Q8N9A8 125 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 WFDC11Q8NEX6 87 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CLHC1Q8NHS4 586 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CDC26Q8NHZ8 85 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 FNDC9Q8TBE3 224 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 BLNKQ8WV28 456 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CIDECQ96AQ7 238 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SLC25A44Q96H78 314 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-211ENST00000476215 FMC1Q96HJ9 113 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SMR3AQ99954 134 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 ANAPC13Q9BS18 74 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 EBPLQ9BY08 206 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SYT4Q9H2B2 425 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 RNF122Q9H9V4 155 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 LRTM1Q9HBL6 345 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 UBQLN4Q9NRR5 601 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 C1orf109Q9NX04 203 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 RBM12B-AS1Q9P1G2 102 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 DKKL1Q9UK85 242 aa2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CHTOPQ9Y3Y2 248 aaKnown RBP2.14□□□□□ -2.07
PTCD3-211ENST00000476215 POLR3HQ9Y535 204 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-211ENST00000476215 SONP18583 2426 aaKnown RBP2.14□□□□□ -2.07
PTCD3-211ENST00000476215 CADP27708 2225 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 A0A1W2PQD3 144 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 RBFOX3A6NFN3 312 aa2.13□□□□□ -2.07
PTCD3-211ENST00000476215 SDHAF1A6NFY7 115 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms