RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TMEM235A6NFC5 223 aa15.03■□□□□ -0
VPS36-203ENST00000475375 DEFB4AO15263 64 aa15.03■□□□□ -0
VPS36-203ENST00000475375 GNG2P59768 71 aa15.03■□□□□ -0
VPS36-203ENST00000475375 SPSB3Q6PJ21 355 aa15.03■□□□□ -0
VPS36-203ENST00000475375 SRSF8Q9BRL6 282 aaKnown RBP15.03■□□□□ -0
VPS36-203ENST00000475375 CHRDL1Q9BU40 450 aa15.03■□□□□ -0
VPS36-203ENST00000475375 C11orf68Q9H3H3 251 aaKnown RBP15.03■□□□□ -0
VPS36-203ENST00000475375 CCL28Q9NRJ3 127 aa15.03■□□□□ -0
VPS36-203ENST00000475375 IGKV3-7A0A075B6H7 116 aa15.02■□□□□ -0
VPS36-203ENST00000475375 IGLL5B9A064 214 aa15.02■□□□□ -0
VPS36-203ENST00000475375 SULT1C2O00338 296 aa15.02■□□□□ -0
VPS36-203ENST00000475375 UPK2O00526 184 aa15.02■□□□□ -0
VPS36-203ENST00000475375 EBAG9O00559 213 aa15.02■□□□□ -0
VPS36-203ENST00000475375 OR13C7P0DN81 318 aa15.02■□□□□ -0
VPS36-203ENST00000475375 TCTAP57738 103 aa15.02■□□□□ -0
VPS36-203ENST00000475375 GDPD1Q8N9F7 314 aa15.02■□□□□ -0
VPS36-203ENST00000475375 DMBX1Q8NFW5 382 aa15.02■□□□□ -0
VPS36-203ENST00000475375 SMIM30A4D0T7 59 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 XRCC3O43542 346 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 NQO2P16083 231 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 CMC4P56277 68 aaPredicted RBP15.01□□□□□ -0.01
VPS36-203ENST00000475375 TAS2R31P59538 309 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 ARPC4P59998 168 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 Q56UQ5 140 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 OR13F1Q8NGS4 319 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 RNF2Q99496 336 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 HINT2Q9BX68 163 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 DUSP21Q9H596 190 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 TMEM140Q9NV12 185 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 C21orf62Q9NYP8 219 aa15.01□□□□□ -0.01
VPS36-203ENST00000475375 DNAH6Q9C0G6 4158 aa15□□□□□ -0.01
VPS36-203ENST00000475375 K7EMT4 169 aa15□□□□□ -0.01
VPS36-203ENST00000475375 CASQ2O14958 399 aaPredicted RBP15□□□□□ -0.01
VPS36-203ENST00000475375 SERPINE2P07093 398 aa15□□□□□ -0.01
VPS36-203ENST00000475375 TRAPPC2P0DI81 140 aa15□□□□□ -0.01
VPS36-203ENST00000475375 TRAPPC2BP0DI82 140 aa15□□□□□ -0.01
VPS36-203ENST00000475375 CATR1Q13166 79 aa15□□□□□ -0.01
VPS36-203ENST00000475375 IGHV3-49A0A0A0MS15 119 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 C15orf62A8K5M9 175 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 RBFOX2O43251 390 aaKnown RBP eCLIP14.99□□□□□ -0.01
VPS36-203ENST00000475375 SSX5O60225 188 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 HPRT1P00492 218 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 CA1P00915 261 aaPredicted RBP14.99□□□□□ -0.01
VPS36-203ENST00000475375 FCGR2CP31995 323 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 MFAP2P55001 183 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 RHPN1-AS1Q9BWJ2 59 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 SLC5A7Q9GZV3 580 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 SMPXQ9UHP9 88 aa14.99□□□□□ -0.01
VPS36-203ENST00000475375 MRPS14O60783 128 aaKnown RBP14.98□□□□□ -0.01
VPS36-203ENST00000475375 YIF1AO95070 293 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 PTHLHP12272 177 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 ADMP35318 185 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 FXYD4P59646 89 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 WT1-ASQ06250 92 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 MSMO1Q15800 293 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 THOC7Q6I9Y2 204 aaKnown RBP14.98□□□□□ -0.01
VPS36-203ENST00000475375 PRSS48Q7RTY5 328 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 HSD17B13Q7Z5P4 300 aaPredicted RBP14.98□□□□□ -0.01
VPS36-203ENST00000475375 GBGT1Q8N5D6 347 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 TMEM116Q8NCL8 245 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 ZBTB34Q8NCN2 500 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 OR51H1Q8NH63 302 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 SCARB1Q8WTV0 552 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 CMTM3Q96MX0 182 aa14.98□□□□□ -0.01
VPS36-203ENST00000475375 IGHV7-4-1A0A0J9YVY3 117 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 SCGNO76038 276 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 PPYP01298 95 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 ERVK-16P61578 105 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 TMEM187Q14656 261 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 POU2AF1Q16633 256 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 C22orf42Q6IC83 251 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 NR2C2APQ86WQ0 139 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 BEST4Q8NFU0 473 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 OR1L8Q8NGR8 309 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 APLNQ9ULZ1 77 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 ETV7Q9Y603 341 aa14.97□□□□□ -0.01
VPS36-203ENST00000475375 F11RQ9Y624 299 aaKnown RBP14.97□□□□□ -0.01
VPS36-203ENST00000475375 TEX50A0A1B0GTY4 177 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 CHEK1O14757 476 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 AADACL3Q5VUY0 350 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 LINC00336Q6ZUF6 198 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 ZNF367Q7RTV3 350 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 ATP6V0BQ99437 205 aa14.96□□□□□ -0.01
VPS36-203ENST00000475375 IGHV3OR16-13A0A075B7E8 117 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 IGHV3-74A0A0B4J1X5 117 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 C11orf94C9JXX5 98 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 F8W735 103 aaPredicted RBP14.95□□□□□ -0.02
VPS36-203ENST00000475375 RELQ04864 619 aaPredicted RBP14.95□□□□□ -0.02
VPS36-203ENST00000475375 ZNF773Q6PK81 442 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 GVQW1Q8N7I0 195 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 LSM10Q969L4 123 aaKnown RBP14.95□□□□□ -0.02
VPS36-203ENST00000475375 PLEKHA2Q9HB19 425 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 NDUFB11Q9NX14 153 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 PKHD1P08F94 4074 aa14.95□□□□□ -0.02
VPS36-203ENST00000475375 TRDV1A0A1B0GX56 115 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 K7EIM0 57 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 NUPL2O15504 423 aaKnown RBP14.94□□□□□ -0.02
VPS36-203ENST00000475375 FCER2P06734 321 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 FGF2P09038 288 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 PAFAH1B2P68402 229 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms