RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 S100GP29377 79 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 GABRA6Q16445 453 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 TP73-AS1Q9UF72 201 aa10.79□□□□□ -0.68
CCNL1-216ENST00000475298 SPAARA0A1B0GVQ0 90 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 NDUFS8O00217 210 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 SAP30O75446 220 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 S1PR2O95136 353 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 IGLL1P15814 213 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 TGFBR3Q03167 851 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 MRPL49Q13405 166 aaKnown RBP10.78□□□□□ -0.68
CCNL1-216ENST00000475298 ZNF585BQ52M93 769 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 FAM214BQ7L5A3 538 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 FAM19A2Q8N3H0 131 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 ST6GALNAC3Q8NDV1 305 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 KLF14Q8TD94 323 aaPredicted RBP10.78□□□□□ -0.68
CCNL1-216ENST00000475298 CLEC7AQ9BXN2 247 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 OBP2BQ9NPH6 170 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 POLDIP2Q9Y2S7 368 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 OTOGLQ3ZCN5 2332 aa10.78□□□□□ -0.68
CCNL1-216ENST00000475298 GAGE12BA1L429 117 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 CORTO00230 105 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 APOBEC3AP31941 199 aaPredicted RBP10.77□□□□□ -0.68
CCNL1-216ENST00000475298 GABRA2P47869 451 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 OR10J3Q5JRS4 329 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 TMEM14EPQ6UXP3 125 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 DEFB124Q8NES8 71 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 OR4P4Q8NGL7 312 aa10.77□□□□□ -0.68
CCNL1-216ENST00000475298 HAND1O96004 215 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 RELBQ01201 579 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 FOXF2Q12947 444 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 ZNF146Q15072 292 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 MPV17L2Q567V2 206 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 STUMQ69YW2 141 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 DRAM1Q8N682 238 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 C9orf106Q8NAJ2 232 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 OR1L1Q8NH94 360 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 SARAFQ96BY9 339 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 GNB1LQ9BYB4 327 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 CHODLQ9H9P2 273 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 KCNIP2Q9NS61 270 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 USF3Q68DE3 2245 aa10.77□□□□□ -0.69
CCNL1-216ENST00000475298 INTS1Q8N201 2190 aaKnown RBP10.77□□□□□ -0.69
CCNL1-216ENST00000475298 TRAV9-2A0A087WT02 112 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 IQCF6A8MYZ5 107 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 NPIPB11E5RHQ5 1161 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 H0YJW9 148 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 K7EN84 100 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 COX5AP20674 150 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 TFF3Q07654 80 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 Q6ZT83 130 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 Q8IYB0 196 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
CCNL1-216ENST00000475298 QTRT1Q9BXR0 403 aaKnown RBP10.76□□□□□ -0.69
CCNL1-216ENST00000475298 BMI1P35226 326 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
CCNL1-216ENST00000475298 AESQ08117 197 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 Q6ZR03 302 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 C19orf35Q6ZS72 473 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 MOB1BQ7L9L4 216 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 TSKUQ8WUA8 353 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 MBNL3Q9NUK0 354 aaKnown RBP10.76□□□□□ -0.69
CCNL1-216ENST00000475298 MGAQ8IWI9 3026 aa10.76□□□□□ -0.69
CCNL1-216ENST00000475298 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 IGHG3P01860 377 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 C11orf53Q8IXP5 236 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 ZNF808Q8N4W9 903 aaPredicted RBP10.75□□□□□ -0.69
CCNL1-216ENST00000475298 WDR31Q8NA23 367 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 OR52L2PQ8NGH6 319 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 C5orf30Q96GV9 206 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 RAMP3O60896 148 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 FABP6P51161 128 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 RHOBP62745 196 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 GUSBP1Q15486 140 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 DEFB125Q8N687 156 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
CCNL1-216ENST00000475298 HEATR1Q9H583 2144 aaKnown RBP10.75□□□□□ -0.69
CCNL1-216ENST00000475298 C12orf77C9JDV5 145 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 J3QW42 95 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 FTH1P19P0C7X4 201 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 ARF6P62330 175 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 PSG9Q00887 426 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 INO80CQ6PI98 192 aaPredicted RBP10.74□□□□□ -0.69
CCNL1-216ENST00000475298 NPCDR1Q9BY65 106 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 PMS2P5A8MQ11 134 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 TOX4O94842 621 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 CECR9P0C854 216 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 CDC34P49427 236 aaPredicted RBP10.74□□□□□ -0.69
CCNL1-216ENST00000475298 LINC00205P59089 165 aa10.74□□□□□ -0.69
CCNL1-216ENST00000475298 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms