RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MAS1LP35410 378 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 RPL27AP46776 148 aaKnown RBP11.66□□□□□ -0.54
VARS-223ENST00000474643 PIGPP57054 158 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
VARS-223ENST00000474643 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
VARS-223ENST00000474643 CCDC71LQ8N9Z2 235 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 MARCH1Q8TCQ1 289 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 MRGPRFQ96AM1 343 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 SLC2A9Q9NRM0 540 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 BET1LQ9NYM9 111 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 C14orf166Q9Y224 244 aaKnown RBP11.66□□□□□ -0.54
VARS-223ENST00000474643 DNAH9Q9NYC9 4486 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 KRASP01116 189 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 SERPINE2P07093 398 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 BTCP35070 178 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 UBE2MP61081 183 aaKnown RBP11.65□□□□□ -0.54
VARS-223ENST00000474643 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 MRGPRG-AS1Q2M3A8 158 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 ACSM6Q6P461 480 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
VARS-223ENST00000474643 TENM3Q9P273 2699 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 PIGBOS1A0A0B4J2F0 54 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 SNAPC5O75971 98 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 HLA-GP17693 338 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 G6PCP35575 357 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 SLC25A42Q86VD7 318 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 COMMD5Q9GZQ3 224 aa11.64□□□□□ -0.55
VARS-223ENST00000474643 FAM240BA0A1B0GVZ2 78 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 HMX3A6NHT5 357 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 UPK2O00526 184 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 PTTG1O95997 202 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 MECP2P51608 486 aaKnown RBP11.63□□□□□ -0.55
VARS-223ENST00000474643 SGPP2Q8IWX5 399 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 CADM3Q8N126 398 aa11.63□□□□□ -0.55
VARS-223ENST00000474643 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
VARS-223ENST00000474643 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 TEX13DA0A0J9YY54 714 aaPredicted RBP11.62□□□□□ -0.55
VARS-223ENST00000474643 C3orf85A0A1B0GTC6 90 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 TCRBP04435 133 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 MYOD1P15172 320 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 RPEL1Q2QD12 228 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 TRIM16LQ309B1 348 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 TMEM128Q5BJH2 165 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 H2BFWTQ7Z2G1 175 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 HAPLN4Q86UW8 402 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 GALNT14Q96FL9 552 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 HINT2Q9BX68 163 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 C5orf66Q9H5L9 145 aa11.62□□□□□ -0.55
VARS-223ENST00000474643 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 H0Y980 276 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 RBMXL2O75526 392 aaKnown RBP11.61□□□□□ -0.55
VARS-223ENST00000474643 ATG12O94817 140 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 DHFRP00374 187 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 CCR6P51684 374 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
VARS-223ENST00000474643 RNASE11Q8TAA1 199 aaKnown RBP11.61□□□□□ -0.55
VARS-223ENST00000474643 ENKURQ8TC29 256 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 USMG5Q96IX5 58 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 RCHY1Q96PM5 261 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 PEF1Q9UBV8 284 aaKnown RBP11.61□□□□□ -0.55
VARS-223ENST00000474643 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
VARS-223ENST00000474643 CRYM-AS1A6NIL9 109 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 PRH1P02810 166 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 IL6RP08887 468 aaPredicted RBP11.6□□□□□ -0.55
VARS-223ENST00000474643 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 DEFA4P12838 97 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 AKR1C2P52895 323 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 DEFA5Q01523 94 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 DHODHQ02127 395 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 SP6Q3SY56 376 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 GTSCR1Q86UQ5 136 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 TP53RKQ96S44 253 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
VARS-223ENST00000474643 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 REG1AP05451 166 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 FGF2P09038 288 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 TRAPPC2P0DI81 140 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 TRAPPC2BP0DI82 140 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 OR2B8PP59922 312 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 SRPXP78539 464 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 RHOGP84095 191 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 RGS21Q2M5E4 152 aa11.59□□□□□ -0.55
VARS-223ENST00000474643 NRARPQ7Z6K4 114 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms