RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 DPH3Q96FX2 82 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 C18orf12Q96KH6 178 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 PEF1Q9UBV8 284 aaKnown RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 SCN5AQ14524 2016 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 MTCL1Q9Y4B5 1905 aaKnown RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 RNF223E7ERA6 249 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 H3BP45 60 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TGFBR3LH3BV60 316 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 ZNF688P0C7X2 276 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TAS2R60P59551 318 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 SRSF2Q01130 221 aaKnown RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 HIST1H1AQ02539 215 aaPredicted RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 MORN2Q502X0 79 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 MORN3Q6PF18 240 aaPredicted RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TMEM144Q7Z5S9 345 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 OR5AU1Q8NGC0 362 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 RCC2Q9P258 522 aaKnown RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TRGV2A0A075B6R0 118 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 DPRXA6NFQ7 191 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 CIDEAO60543 219 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 FSTL3O95633 263 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 FAM157CP0CG43 387 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 RHOGP84095 191 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 LOXL1Q08397 574 aaPredicted RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 IQCJQ1A5X6 159 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 C5orf64Q2M2E5 130 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 BSXQ3C1V8 233 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 DEFB121Q5J5C9 76 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TEX36Q5VZQ5 186 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 CFAP161Q6P656 301 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 OR10S1Q8NGN2 331 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 FAM110DQ8TAY7 271 aaPredicted RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 NAA50Q9GZZ1 169 aaKnown RBP3.85□□□□□ -1.79
CCNL1-215ENST00000474539 FBXL15Q9H469 300 aa3.85□□□□□ -1.79
CCNL1-215ENST00000474539 TRAV8-7A0A075B6U6 113 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 TRAV8-6A0A0B4J262 113 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 PINLYPA6NC86 204 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 RBFOX3A6NFN3 312 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 E7EQL1 145 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 H3BUX3 64 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 IGLV1-44P01699 117 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 LMO1P25800 156 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ZNF474Q6S9Z5 364 aaPredicted RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ALKAL2Q6UX46 152 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 LINC00477Q96M19 166 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ZFP30Q9Y2G7 519 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 KLK5Q9Y337 293 aaPredicted RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 KNTC1P50748 2209 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 RHODO00212 210 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 SCGB1D1O95968 90 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 COX6CP09669 75 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 TGFBR1P36897 503 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 TFPI2P48307 235 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 CD81P60033 236 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 HIST3H3Q16695 136 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 TUSC1Q2TAM9 212 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 C1orf194Q5T5A4 169 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 DHRS11Q6UWP2 260 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 CYB561D1Q8N8Q1 229 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ZNRF1Q8ND25 227 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ZNF680Q8NEM1 530 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 ANGPTL6Q8NI99 470 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 TAF15Q92804 592 aaKnown RBP eCLIP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 WDR89Q96FK6 387 aaPredicted RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 MRPL20Q9BYC9 149 aaKnown RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 BPESC1Q9GZL8 116 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 WNT10AQ9GZT5 417 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
CCNL1-215ENST00000474539 PDCD11Q14690 1871 aaKnown RBP3.84□□□□□ -1.79
CCNL1-215ENST00000474539 IGLV3-9A0A075B6K5 115 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 CENPVL1A0A0U1RR11 272 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 LOC102723971A0A1B0GUV8 181 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 HLA-DQA1P01909 254 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 CCKARP32238 428 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 PLAURQ03405 335 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 FOXE3Q13461 319 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 Q1RN00 199 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 Q6ZNX1 250 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 OR2D3Q8NGH3 330 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 PRELID3AQ96N28 172 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 PRDM13Q9H4Q3 707 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 FUT9Q9Y231 359 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 KLHDC2Q9Y2U9 406 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 TRAPPC1Q9Y5R8 145 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 MYO7AQ13402 2215 aa3.84□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV3-72A0A0B4J1Y9 119 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV1-3A0A0C4DH29 117 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 CBY3A6NI87 242 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM250H0YL14 139 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 BUB1B-PAK6H3BSN5 160 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 APOMO95445 188 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 HSPB1P04792 205 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 MYCNOSP40205 109 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 C2orf83Q53S99 150 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 HCP5Q6MZN7 132 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms