RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CD58P19256 250 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LIM2P55344 173 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 RPL18AQ02543 176 aaKnown RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 HES1Q14469 280 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 CSRP2Q16527 193 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ETDBQ3ZM63 59 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 PAPPA-AS1Q5QFB9 102 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 C1orf189Q5VU69 101 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LCN8Q6JVE9 175 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 UNQ9165/PRO28630Q6UXU0 137 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 SSX8Q7RTT4 187 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 TMEM256Q8N2U0 113 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 OR10J6PQ8NGY7 276 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LSM10Q969L4 123 aaKnown RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 BORCS8Q96FH0 119 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 IGF2BP2-AS1Q96M15 143 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 C18orf15Q96N68 181 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 AP1S3Q96PC3 154 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LAMB2P55268 1798 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 RGPD4Q7Z3J3 1758 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 RGPD1P0DJD0 1748 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 H3BUT2 72 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 HCRTO43612 131 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LINC00032P0C843 101 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ACVRL1P37023 503 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 SEC11AP67812 179 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 POU3F1Q03052 451 aaPredicted RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 LYRM7Q5U5X0 104 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LYPD4Q6UWN0 246 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 TCF23Q7RTU1 214 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ZNF571Q7Z3V5 609 aaPredicted RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 C17orf64Q86WR6 236 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 MED12LQ86YW9 2145 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 RYBPQ8N488 228 aaPredicted RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 ZFP62Q8NB50 900 aaPredicted RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 OLIG1Q8TAK6 271 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 IGFBPL1Q8WX77 278 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ARID2Q68CP9 1835 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 EXPH5Q8NEV8 1989 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 CCL21O00585 134 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 GASTP01350 101 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 IGHG1P01857 330 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 SDC2P34741 201 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 HLA-DRB3P79483 266 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 LINC00303Q3SY05 128 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 OR10P1Q8NGE3 313 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 ZNF689Q96CS4 500 aaPredicted RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 PRELID3AQ96N28 172 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 VGLL1Q99990 258 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 VSIG4Q9Y279 399 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 AMMECR1Q9Y4X0 333 aaPredicted RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 BTAF1O14981 1849 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 TRAV4A0A0B4J268 109 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 A0A1B0GXF2 115 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 DIRC3C9JPN6 131 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 PSMB8P28062 276 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 RPL34P49207 117 aaKnown RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 LINC00310P59036 64 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 TMEM207Q6UWW9 146 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 AMTNQ6UX39 209 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 C20orf204Q6ZNR8 217 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 TSACCQ96A04 125 aaPredicted RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 GNPNAT1Q96EK6 184 aaPredicted RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 SPACA5Q96QH8 159 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 POMKQ9H5K3 350 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 OR5V1Q9UGF6 321 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 PCTPQ9UKL6 214 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 HCFC1P51610 2035 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 C5P01031 1676 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 HLA-DRB1P01911 266 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 RBP4P02753 201 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 IL5P05113 134 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 MDKP21741 143 aaPredicted RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 RPS4Y1P22090 263 aaKnown RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 PPIBP23284 216 aaKnown RBP2.8□□□□□ -1.96
UBR3-208ENST00000474426 EBI3Q14213 229 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 FBXL14Q8N1E6 418 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 FGF11Q92914 225 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 PLA2G12BQ9BX93 195 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 CYTL1Q9NRR1 136 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 DNAJC15Q9Y5T4 150 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 KIAA1210Q9ULL0 1709 aa2.8□□□□□ -1.96
UBR3-208ENST00000474426 TRAV1-1A0A0B4J248 108 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 UQCRQO14949 82 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 NCR2O95944 276 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 PTHP01270 115 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 IGHG2P01859 326 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 HLA-DQA2P01906 255 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 CRYGAP11844 174 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 TPT1P13693 172 aaKnown RBP2.79□□□□□ -1.96
UBR3-208ENST00000474426 PLGLB1Q02325 96 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 ZNF90Q03938 601 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 RFLNAQ6ZTI6 216 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 HMGN2P46Q86SG4 172 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 C10orf126Q8N4M7 172 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 WFDC11Q8NEX6 87 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 ARRDC1-AS1Q9H2J1 176 aa2.79□□□□□ -1.96
UBR3-208ENST00000474426 PLEKHF2Q9H8W4 249 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms