RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CA3P07451 260 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SMIM13P0DJ93 91 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 HIST1H1TP22492 207 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TCTAP57738 103 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 FUT7Q11130 342 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 CATR1Q13166 79 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 RUNX3Q13761 415 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF146Q15072 292 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TNXAQ16473 311 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 CEACAM16Q2WEN9 425 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 CXorf66Q5JRM2 361 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 Q6ZS49 121 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF695Q8IW36 515 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SUMF1Q8NBK3 374 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF114Q8NC26 417 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 OR1L3Q8NH93 324 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 C8orf44Q96CB5 159 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TP73-AS1Q9UF72 201 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 POLDIP2Q9Y2S7 368 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 EML5Q05BV3 1969 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 KIR2DS5A0A0G2JLQ3 304 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A0G2JNG1 304 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 C3orf85A0A1B0GTC6 90 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SMIM9A6NGZ8 99 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 F8WDY8 70 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 CEACAM4O75871 244 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NDUFB4O95168 129 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 IGHV3-7P01780 117 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NHLRC4P0CG21 123 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 BLVRBP30043 206 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 VDAC2P45880 294 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 CLDN17P56750 224 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 WFDC2Q14508 124 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 KIR2DS5Q14953 304 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 RNPS1Q15287 305 aaKnown RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NMSQ5H8A3 153 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 Q6AWC8 147 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 OR52N5Q8NH56 324 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 C8orf46Q8TAG6 207 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TAF15Q92804 592 aaKnown RBP eCLIP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM60AQ9NP50 221 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 RABAC1Q9UI14 185 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1W2PRE2 83 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM202A6NGA9 273 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 C9JCJ5 164 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NUDT14O95848 222 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 HLA-DOBP13765 273 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SRD5A1P18405 259 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 SPINT3P49223 89 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 ETDBQ3ZM63 59 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 OR2T6Q8NHC8 308 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 C16orf52Q8NHV5 167 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 WIPF2Q8TF74 440 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 DDB2Q92466 427 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NPIPB3Q92617 1050 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 DGAT2Q96PD7 388 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM204Q9BSN7 226 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 OR1A1Q9P1Q5 309 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 FCN3O75636 299 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 COX5AP20674 150 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 PRTN3P24158 256 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 RPS27P42677 84 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 XGP55808 180 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 RPS24P62847 133 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TRIP6Q15654 476 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TSPO2Q5TGU0 170 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 OTPQ5XKR4 325 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 LINC00696Q6ZRV3 163 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 PRSS41Q7RTY9 318 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF645Q8N7E2 425 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 OR10G7Q8NGN6 311 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 H1FXQ92522 213 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 OXGR1Q96P68 337 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 PRR25Q96S07 402 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 MAP1LC3AQ9H492 121 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC25A22Q9H936 323 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TNFRSF19Q9NS68 423 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 HRASLS2Q9NWW9 162 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 KIF26BQ2KJY2 2108 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TRIP12Q14669 1992 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 RHODO00212 210 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 CXorf1O96002 111 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 NAPSAO96009 420 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 IGKV1D-33P01593 117 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 IGKV1-33P01594 117 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 IGHG3P01860 377 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 G6PCP35575 357 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 MFAP4P55083 255 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 RPL8P62917 257 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 FOXI1Q12951 378 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TIGITQ495A1 244 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms