RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 IFITM3Q01628 133 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 REG3AQ06141 175 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 FABP9Q0Z7S8 132 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LY6DQ14210 128 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 C16orf72Q14CZ0 275 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 MMDQ15546 238 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 ZNF404Q494X3 552 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 C19orf48Q6RUI8 117 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 RASL11AQ6T310 242 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 FBXW12Q6X9E4 464 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 IL34Q6ZMJ4 242 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 FAM19A3Q7Z5A8 133 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 CTAGE3PQ8IX95 158 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 OR8I2Q8N0Y5 310 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LINC00337Q8N6G1 96 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 ZNF433Q8N7K0 673 aaPredicted RBP4.57□□□□□ -1.68
RTF1-203ENST00000473214 OR2G3Q8NGZ4 309 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 OR2T27Q8NH04 317 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 TWIST2Q8WVJ9 160 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 ADAT3Q96EY9 351 aaPredicted RBP4.57□□□□□ -1.68
RTF1-203ENST00000473214 ZNF778Q96MU6 729 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 SIGLEC12Q96PQ1 595 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 NMNAT3Q96T66 252 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 COMMD5Q9GZQ3 224 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 DEFB127Q9H1M4 99 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 KCNIP2Q9NS61 270 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LINC00527Q9UJ94 153 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 ZFP30Q9Y2G7 519 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 KLF13Q9Y2Y9 288 aaPredicted RBP4.57□□□□□ -1.68
RTF1-203ENST00000473214 TENM4Q6N022 2769 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LOC102724200A0A096LPH7 203 aaPredicted RBP4.56□□□□□ -1.68
RTF1-203ENST00000473214 TMED7-TICAM2A0A0A6YYA0 188 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 OR4C45A6NMZ5 311 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 CLDN25C9JDP6 229 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 SNAP91O60641 907 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ZNF682O95780 498 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 OR4Q2P0C623 313 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 SMIM17P0DL12 118 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 NTF3P20783 257 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 IL2RGP31785 369 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 TDGF1P3P51864 188 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 TAS2R19P59542 299 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 PSG9Q00887 426 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ERCC8Q13216 396 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ZNF146Q15072 292 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 TEX261Q6UWH6 196 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 HRCT1Q6UXD1 115 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 PIP4P1Q86T03 277 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 LINC01551Q86U37 167 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 TCTE3Q8IZS6 198 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 KRTCAP2Q8N6L1 136 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ACBD7Q8N6N7 88 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ZIC4Q8N9L1 334 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 DCAF4L2Q8NA75 395 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 SFT2D1Q8WV19 159 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 TAF15Q92804 592 aaKnown RBP eCLIP4.56□□□□□ -1.68
RTF1-203ENST00000473214 SOSTQ9BQB4 213 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ZNF71Q9NQZ8 489 aaPredicted RBP4.56□□□□□ -1.68
RTF1-203ENST00000473214 AIG1Q9NVV5 245 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 ANAPC10Q9UM13 185 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 FIS1Q9Y3D6 152 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 MYH15Q9Y2K3 1946 aa4.56□□□□□ -1.68
RTF1-203ENST00000473214 IGHV6-1A0A0B4J1U7 121 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 IGKV1-8A0A0C4DH67 115 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 A0A1B0GW64 132 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 DNAJC9-AS1A6NH13 148 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 F5H5P2 479 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TBL1XO60907 577 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 NRASP01111 189 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 IFNA7P01567 189 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 FABP3P05413 133 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 ADRA2AP08913 450 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 PSG2P11465 335 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 UBE2NP61088 152 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 RPS25P62851 125 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 GRB2P62993 217 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 FBXL19-AS1Q494R0 122 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 GLYATQ6IB77 296 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 ZNF493Q6ZR52 646 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 YTHDF3Q7Z739 585 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 PRNTQ86SH4 94 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 CROCCP2Q86T23 111 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TMEM61Q8N0U2 210 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TCTEX1D1Q8N7M0 179 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 SLC25A40Q8TBP6 338 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 DCAKDQ8WVC6 231 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 CLEC7AQ9BXN2 247 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 POLR2J2Q9GZM3 115 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 OR8D2Q9GZM6 311 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 POLR2J3Q9H1A7 115 aaKnown RBP4.55□□□□□ -1.68
RTF1-203ENST00000473214 CST9LQ9H4G1 147 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 TAF9BQ9HBM6 251 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 PARP11Q9NR21 331 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 MED31Q9Y3C7 131 aa4.55□□□□□ -1.68
RTF1-203ENST00000473214 DOCK6Q96HP0 2047 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms