RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TMEM230Q96A57 120 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
TPM3-216ENST00000473036 OR2A7Q96R45 310 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 TMED3Q9Y3Q3 217 aa10.19□□□□□ -0.78
TPM3-216ENST00000473036 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 MSGN1A6NI15 193 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 SSNA1O43805 119 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 CNIH1O95406 144 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 FGF2P09038 288 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 OR5AC1P0C628 307 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 SPNP16150 400 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
TPM3-216ENST00000473036 DEFA5Q01523 94 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 TMEM187Q14656 261 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 SAMD5Q5TGI4 173 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 Q6ZNX1 250 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 OR5T1Q8NG75 326 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 SRSF12Q8WXF0 261 aaKnown RBP10.18□□□□□ -0.78
TPM3-216ENST00000473036 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 RAX2Q96IS3 184 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 TP53RKQ96S44 253 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 GON7Q9BXV9 100 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 ZFP57Q9NU63 452 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
TPM3-216ENST00000473036 FOXA2Q9Y261 457 aaPredicted RBP10.18□□□□□ -0.78
TPM3-216ENST00000473036 HMX3A6NHT5 357 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 DBX1A6NMT0 343 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 UPK2O00526 184 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 OR9G9P0C7N8 305 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 PF4V1P10720 104 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 CDX1P47902 265 aaPredicted RBP10.17□□□□□ -0.78
TPM3-216ENST00000473036 CXorf66Q5JRM2 361 aaPredicted RBP10.17□□□□□ -0.78
TPM3-216ENST00000473036 MMD2Q8IY49 270 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 KLHL30-AS1Q8NEE0 82 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 RNASE11Q8TAA1 199 aaKnown RBP10.17□□□□□ -0.78
TPM3-216ENST00000473036 LSM10Q969L4 123 aaKnown RBP10.17□□□□□ -0.78
TPM3-216ENST00000473036 MS4A10Q96PG2 267 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 SPIN2AQ99865 258 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 SPIN2BQ9BPZ2 258 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 MED28Q9H204 178 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 FKBP11Q9NYL4 201 aa10.17□□□□□ -0.78
TPM3-216ENST00000473036 MARCH11A6NNE9 402 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 I3L521 148 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 PRH1P02810 166 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 SLC25A6P12236 298 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 HLA-GP17693 338 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 G6PCP35575 357 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 CYCSP99999 105 aaKnown RBP10.16□□□□□ -0.78
TPM3-216ENST00000473036 SP6Q3SY56 376 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 TMEM268Q5VZI3 342 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 H2BFWTQ7Z2G1 175 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 WFDC9Q8NEX5 89 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 DMBX1Q8NFW5 382 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 OR4F17Q8NGA8 305 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 SEC22AQ96IW7 307 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 OR4F4Q96R69 305 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 P2RX4Q99571 388 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 NSG2Q9Y328 171 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 HUWE1Q7Z6Z7 4374 aaKnown RBP10.16□□□□□ -0.78
TPM3-216ENST00000473036 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
TPM3-216ENST00000473036 G3V4G9 280 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 SNAPC5O75971 98 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 LY86O95711 162 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 KRASP01116 189 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 IGKV1-5P01602 117 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 P0C879 139 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 AKR1C2P52895 323 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 OR2B8PP59922 312 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 RPL8P62917 257 aaKnown RBP10.15□□□□□ -0.78
TPM3-216ENST00000473036 TMEM267Q0VDI3 215 aaPredicted RBP10.15□□□□□ -0.78
TPM3-216ENST00000473036 IZUMO4Q1ZYL8 232 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 THOC7Q6I9Y2 204 aaKnown RBP10.15□□□□□ -0.78
TPM3-216ENST00000473036 MRPL41Q8IXM3 137 aaKnown RBP10.15□□□□□ -0.78
TPM3-216ENST00000473036 SELENOHQ8IZQ5 122 aaKnown RBP10.15□□□□□ -0.78
TPM3-216ENST00000473036 UXS1Q8NBZ7 420 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 OR5M8Q8NGP6 311 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 LHFPL5Q8TAF8 219 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 UBE2E2Q96LR5 201 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 OR5B12Q96R08 314 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 ALG5Q9Y673 324 aa10.15□□□□□ -0.78
TPM3-216ENST00000473036 A0A0G2JRQ6 117 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 A0A1B0GU03 582 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 NUDT19A8MXV4 375 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 TRAPPC2P0DI81 140 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 TRAPPC2BP0DI82 140 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 AREGP15514 252 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 MAS1LP35410 378 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 RPL27AP46776 148 aaKnown RBP10.14□□□□□ -0.79
TPM3-216ENST00000473036 FHL3Q13643 280 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 SEC22CQ9BRL7 303 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 COA4Q9NYJ1 87 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 DMRT1Q9Y5R6 373 aa10.14□□□□□ -0.79
TPM3-216ENST00000473036 TEX50A0A1B0GTY4 177 aa10.13□□□□□ -0.79
TPM3-216ENST00000473036 CCL24O00175 119 aa10.13□□□□□ -0.79
TPM3-216ENST00000473036 ACTL6BO94805 426 aa10.13□□□□□ -0.79
TPM3-216ENST00000473036 BRI3O95415 125 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms