RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 UFD1Q92890 307 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 GALNT14Q96FL9 552 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 RNF2Q99496 336 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 CSTL1Q9H114 145 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
VCL-204ENST00000472585 CCL28Q9NRJ3 127 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 PRELID3BQ9Y3B1 194 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 UPK2O00526 184 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 TNFSF12O43508 249 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
VCL-204ENST00000472585 HSMCR30P0CW71 290 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 DTYMKP23919 212 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 WT1-ASQ06250 92 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 SSX1Q16384 188 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 TIMM50Q3ZCQ8 353 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 LILRB2Q8N423 598 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 OR4S2Q8NH73 311 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 VSTM2AQ8TAG5 236 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 CXorf58Q96LI9 332 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 DUSP21Q9H596 190 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 BET1LQ9NYM9 111 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 MRPS7Q9Y2R9 242 aaKnown RBP6.78□□□□□ -1.32
VCL-204ENST00000472585 ETV7Q9Y603 341 aa6.78□□□□□ -1.32
VCL-204ENST00000472585 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
VCL-204ENST00000472585 IGHV3-49A0A0A0MS15 119 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 TEX50A0A1B0GTY4 177 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 IFITM5A6NNB3 132 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 MPTX1A8MV57 137 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 K7EMT4 169 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 ARL6IP5O75915 188 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 DHFRP00374 187 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 CTSGP08311 255 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 RBMY1A1P0DJD3 496 aaKnown RBP6.77□□□□□ -1.33
VCL-204ENST00000472585 RBMY1CP0DJD4 496 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
VCL-204ENST00000472585 SOHLH1Q5JUK2 328 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 OGFRL1Q5TC84 451 aaPredicted RBP6.77□□□□□ -1.33
VCL-204ENST00000472585 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 LAMTOR1Q6IAA8 161 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 CNIH2Q6PI25 160 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 ZNF66Q6ZN08 573 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 VN1R17PQ8TDU5 208 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 SCARB1Q8WTV0 552 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 NUDCD2Q8WVJ2 157 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 HSD17B10Q99714 261 aaKnown RBP6.77□□□□□ -1.33
VCL-204ENST00000472585 SCRT1Q9BWW7 348 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 DAZ1Q9NQZ3 744 aaKnown RBP6.77□□□□□ -1.33
VCL-204ENST00000472585 SMPXQ9UHP9 88 aa6.77□□□□□ -1.33
VCL-204ENST00000472585 IGHV4-4A0A075B6R2 117 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 IGHV3-74A0A0B4J1X5 117 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 TRAV1-2A0A0B4J238 106 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 SMIM30A4D0T7 59 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 TMEM235A6NFC5 223 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 K7EIM0 57 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 SULT1C2O00338 296 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 NDUFA4O00483 81 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 CHEK1O14757 476 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 SLC22A5O76082 557 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 HRASP01112 189 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 SERPINE2P07093 398 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 P0DMU3 169 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 FAM231AP0DMU4 169 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 FAM231CP0DMU5 169 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 CD36P16671 472 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 GADD45AP24522 165 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 TALDO1P37837 337 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 TFPI2P48307 235 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 MLLT11Q13015 90 aaPredicted RBP6.76□□□□□ -1.33
VCL-204ENST00000472585 POU2AF1Q16633 256 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 HACD4Q5VWC8 232 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 FAM24BQ8N5W8 94 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 Q8NAQ8 132 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 MGLLQ99685 303 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 C20orf24Q9BUV8 137 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 ATG5Q9H1Y0 275 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 HRASLSQ9HDD0 168 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 ANXA10Q9UJ72 324 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 HSPG2P98160 4391 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 HERC1Q15751 4861 aa6.76□□□□□ -1.33
VCL-204ENST00000472585 IGKV3-7A0A075B6H7 116 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 IGHV7-4-1A0A0J9YVY3 117 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
VCL-204ENST00000472585 APOHP02749 345 aaPredicted RBP6.75□□□□□ -1.33
VCL-204ENST00000472585 CTXN2P0C2S0 81 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 OR13C7P0DN81 318 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 RCN1Q15293 331 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 SLC25A24Q6NUK1 477 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 SPAG16Q8N0X2 631 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 GBGT1Q8N5D6 347 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 GDPD1Q8N9F7 314 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 BSCL2Q96G97 398 aaPredicted RBP6.75□□□□□ -1.33
VCL-204ENST00000472585 DCSTAMPQ9H295 470 aa6.75□□□□□ -1.33
VCL-204ENST00000472585 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms