RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ODF3BA8MYP8 253 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 KLRC4O43908 158 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 IGKV1-5P01602 117 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 HLA-DMBP28068 263 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 AP1S1P61966 158 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 CCL20P78556 96 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 AKR1C1Q04828 323 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 C12orf45Q8N5I9 185 aaPredicted RBP3.38□□□□□ -1.87
SMC5-202ENST00000471372 OR4C16Q8NGL9 310 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 IMMP2LQ96T52 175 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 XAGE1AQ9HD64 81 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 E7EQL1 145 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 FABP1P07148 127 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 GABRA4P48169 554 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 AADACL3Q5VUY0 350 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 TMPPEQ6ZT21 453 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 CCDC90BQ9GZT6 254 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 CYSLTR1Q9Y271 337 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 SHROOM3Q8TF72 1996 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 DOCK5Q9H7D0 1870 aa3.37□□□□□ -1.87
SMC5-202ENST00000471372 TRAV9-1A0A075B6T8 112 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 SDHAF1A6NFY7 115 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 H3BT86 120 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 SMIM10L2AP0DMW4 78 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 SMIM10L2BP0DMW5 78 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 ALDH3A1P30838 453 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
SMC5-202ENST00000471372 ZNF705AQ6ZN79 300 aaPredicted RBP3.36□□□□□ -1.87
SMC5-202ENST00000471372 ZNF767PQ75MW2 155 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 OR11H6Q8NGC7 330 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 OR51T1Q8NGJ9 327 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 DERL1Q9BUN8 251 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 TIMM22Q9Y584 194 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 ZNF532Q9HCE3 1301 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 UNC13AQ9UPW8 1703 aa3.36□□□□□ -1.87
SMC5-202ENST00000471372 TRGV5A0A0B4J1U4 118 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 SIGLEC16A6NMB1 481 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 C8GP07360 202 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 RBP1P09455 135 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
SMC5-202ENST00000471372 MEF2BQ02080 365 aaPredicted RBP3.35□□□□□ -1.87
SMC5-202ENST00000471372 RPL18Q07020 188 aaKnown RBP3.35□□□□□ -1.87
SMC5-202ENST00000471372 GNPDA2Q8TDQ7 276 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 H1FXQ92522 213 aaKnown RBP3.35□□□□□ -1.87
SMC5-202ENST00000471372 C20orf27Q9GZN8 174 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 NAT8Q9UHE5 227 aa3.35□□□□□ -1.87
SMC5-202ENST00000471372 UTP11Q9Y3A2 253 aaKnown RBP3.35□□□□□ -1.87
SMC5-202ENST00000471372 A0A0J9YW62 118 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 C2orf74A8MZ97 194 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 S1PR2O95136 353 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 OR4E1P0C645 316 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 SMIM17P0DL12 118 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 HSPE1P61604 102 aaKnown RBP3.34□□□□□ -1.87
SMC5-202ENST00000471372 ARHGAP11BQ3KRB8 267 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 RPL22L1Q6P5R6 122 aaKnown RBP3.34□□□□□ -1.87
SMC5-202ENST00000471372 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 LHFPL1Q86WI0 220 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 OR13C4Q8NGS5 318 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 SLC25A40Q8TBP6 338 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 ANP32BQ92688 251 aaKnown RBP3.34□□□□□ -1.87
SMC5-202ENST00000471372 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 VCX3BQ9H321 246 aa3.34□□□□□ -1.87
SMC5-202ENST00000471372 PGRMC1O00264 195 aaKnown RBP3.33□□□□□ -1.88
SMC5-202ENST00000471372 ZNF73O43830 326 aaPredicted RBP3.33□□□□□ -1.88
SMC5-202ENST00000471372 LGALS1P09382 135 aaKnown RBP3.33□□□□□ -1.88
SMC5-202ENST00000471372 UCHL1P09936 223 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 DEFA4P12838 97 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 GZMHP20718 246 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 ERP29P30040 261 aaKnown RBP3.33□□□□□ -1.88
SMC5-202ENST00000471372 POU6F1Q14863 301 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 MOGQ16653 247 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 Q6ZS52 159 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 SLC7A6Q92536 515 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 TUBA4BQ9H853 241 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 CCL26Q9Y258 94 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 RTL1A6NKG5 1358 aa3.33□□□□□ -1.88
SMC5-202ENST00000471372 NYNRINQ9P2P1 1898 aaKnown RBP3.33□□□□□ -1.88
SMC5-202ENST00000471372 TRAPPC13A5PLN9 417 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 FABP5P3A8MUU1 101 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 HMGB3O15347 200 aaKnown RBP3.32□□□□□ -1.88
SMC5-202ENST00000471372 CREBL2O60519 120 aaPredicted RBP3.32□□□□□ -1.88
SMC5-202ENST00000471372 ATG12O94817 140 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 IGHV3-7P01780 117 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 C1QAP02745 245 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 MSNP26038 577 aaKnown RBP3.32□□□□□ -1.88
SMC5-202ENST00000471372 EVX1P49640 407 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 RAB14P61106 215 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 KISS1Q15726 138 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 IBA57Q5T440 356 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms