RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 UXS1Q8NBZ7 420 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 SRSF12Q8WXF0 261 aaKnown RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 BSCL2Q96G97 398 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 NOL4LQ96MY1 436 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 NMES1Q9C002 83 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 ZNF436Q9C0F3 470 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 RBKSQ9H477 322 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 RANGRFQ9HD47 186 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 OR5AC2Q9NZP5 309 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 LINC00527Q9UJ94 153 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 SETD2Q9BYW2 2564 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
SF3A1-207ENST00000471342 F8W735 103 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-207ENST00000471342 FBXO24O75426 580 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 CCNKO75909 580 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 NXPH3O95157 252 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 NDUFA7O95182 113 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 BRI3O95415 125 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 IGLV1-40P01703 118 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 RNASE2P10153 161 aaKnown RBP7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MAS1LP35410 378 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MLANAQ16655 118 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 VMA21Q3ZAQ7 101 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 TTC9CQ8N5M4 171 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 OR2C3Q8N628 320 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 OR5B3Q8NH48 314 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 SGMS2Q8NHU3 365 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 LINC01006Q8NI28 216 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MYOZ3Q8TDC0 251 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 RRNAD1Q96FB5 475 aaKnown RBP7.73□□□□□ -1.17
SF3A1-207ENST00000471342 OR4C12Q96R67 309 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MAGT1Q9H0U3 335 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MED28Q9H204 178 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 MRPL36Q9P0J6 103 aaKnown RBP7.73□□□□□ -1.17
SF3A1-207ENST00000471342 PITPNC1Q9UKF7 332 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 OR51B2Q9Y5P1 312 aa7.73□□□□□ -1.17
SF3A1-207ENST00000471342 TRBV9A0A0B4J1U6 114 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 C13orf42A0A1B0GVH6 325 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 FAM90A26D6RGX4 464 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 MPC2O95563 127 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 GIPP09681 153 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-207ENST00000471342 RPL27AP46776 148 aaKnown RBP7.72□□□□□ -1.17
SF3A1-207ENST00000471342 AKR1C2P52895 323 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 PROK1P58294 105 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 SPCS3P61009 180 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 KRTAP24-1Q3LI83 254 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 HIST2H2BDQ6DRA6 164 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 TMEM14EPQ6UXP3 125 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 RNF152Q8N8N0 203 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 LFNGQ8NES3 379 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 OR1L8Q8NGR8 309 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 OR1S1Q8NH92 325 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 VSTM2AQ8TAG5 236 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 PPP1R1CQ8WVI7 109 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 P2RX4Q99571 388 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 KLK15Q9H2R5 256 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 TRRAPQ9Y4A5 3859 aa7.72□□□□□ -1.17
SF3A1-207ENST00000471342 SSNA1O43805 119 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 DEDDO75618 318 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 MDKP21741 143 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 RPL15P61313 204 aaKnown RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 TNXAQ16473 311 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 AKIRIN2Q53H80 203 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 LAMTOR1Q6IAA8 161 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 GSG1LQ6UXU4 331 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 TCTE3Q8IZS6 198 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 STPG2Q8N412 459 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 ZNF114Q8NC26 417 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 ZNF418Q8TF45 676 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 ARPC1AQ92747 370 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 AIFM2Q9BRQ8 373 aa7.71□□□□□ -1.18
SF3A1-207ENST00000471342 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-207ENST00000471342 IGLV11-55A0A075B6I3 123 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 IGSF23A1L1A6 192 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 RNF222A6NCQ9 220 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 C5orf51A6NDU8 294 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 NPIPB5A8MRT5 1133 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 K7EIM0 57 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 M0QZK8 103 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 TCF21O43680 179 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 SYNGR2O43760 224 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 IGHG4P01861 327 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 PRH1P02810 166 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 REG1AP05451 166 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 APELAP0DMC3 54 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 HKR1P10072 659 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 SLC25A4P12235 298 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 PSMB8P28062 276 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 PSMB6P28072 239 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 NKX2-1P43699 371 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-207ENST00000471342 ERVK-16P61578 105 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 CD83Q01151 205 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 OR4A16Q8NH70 328 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms