RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KLHL12Q53G59 568 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 GLYATL3Q5SZD4 288 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 LDLRAD2Q5SZI1 272 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 TEX36Q5VZQ5 186 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 MBOAT2Q6ZWT7 520 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 TMEM183AQ8IXX5 376 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 DYNAPQ8N1N2 210 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 OR4D6Q8NGJ1 314 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 OR5L1Q8NGL2 311 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 RASSF5Q8WWW0 418 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 GPX7Q96SL4 187 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 ADAT1Q9BUB4 502 aaKnown RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 HDHD2Q9H0R4 259 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 CMTM6Q9NX76 183 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 CYB5R1Q9UHQ9 305 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 TSSC4Q9Y5U2 329 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-204ENST00000471245 IER3IP1Q9Y5U9 82 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 V9GYY9 64 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
CKS1B-204ENST00000471245 A6NDX4 124 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 M0R1W7 72 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 SLC2A1P11166 492 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 HIST1H1CP16403 213 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 F2RP25116 425 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 CXCL5P42830 114 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 RAB13P51153 203 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 SLC35B1P78383 322 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 COTL1Q14019 142 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 ATP6V1FQ16864 119 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 TPTE2P1Q5T6R2 138 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 SBSPONQ8IVN8 264 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 SELENOHQ8IZQ5 122 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 Q8N9W7 124 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 DUSP18Q8NEJ0 188 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 OR8J3Q8NGG0 315 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 OR6K6Q8NGW6 343 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 OR10J6PQ8NGY7 276 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 OR4K13Q8NH42 304 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 LRRC29Q8WV35 223 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 H1FXQ92522 213 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 EEF1AKMT3Q96AZ1 226 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 CENPNQ96H22 339 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 GAFA1Q96PS6 74 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 NMNAT3Q96T66 252 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 PITX2Q99697 317 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 PARP12Q9H0J9 701 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 METTL8Q9H825 291 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 OR2S2Q9NQN1 319 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 NKIRAS1Q9NYS0 192 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 CLEC2DQ9UHP7 191 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
CKS1B-204ENST00000471245 ST3GAL6Q9Y274 331 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 TNCP24821 2201 aa3.68□□□□□ -1.82
CKS1B-204ENST00000471245 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 TVP23AA6NH52 213 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 VGLL3A8MV65 326 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 M0R135 149 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 NDUFB3O43676 98 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
CKS1B-204ENST00000471245 SC5DO75845 299 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 NDUFB2O95178 105 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 HPRT1P00492 218 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF3P17036 446 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 PYCR1P32322 319 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF121P58317 390 aaPredicted RBP3.67□□□□□ -1.82
CKS1B-204ENST00000471245 FAM3AP98173 230 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 IL5RAQ01344 420 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 C10orf99Q6UWK7 81 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 SLC36A1Q7Z2H8 476 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 OR1M1Q8NGA1 313 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 CREB3L1Q96BA8 519 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF799Q96GE5 643 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 ERMAPQ96PL5 475 aaPredicted RBP3.67□□□□□ -1.82
CKS1B-204ENST00000471245 TLNRD1Q9H1K6 362 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 VCX3AQ9NNX9 186 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 POLR1DQ9Y2S0 133 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 ENPP4Q9Y6X5 453 aa3.67□□□□□ -1.82
CKS1B-204ENST00000471245 IGKV1D-17A0A075B6S4 117 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 A0A1B0GW15 77 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 GGT3PA6NGU5 568 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 CXCR6O00574 342 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 NME4O00746 187 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 BHLHE40O14503 412 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 CDIPTO14735 213 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 MRASO14807 208 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 EDF1O60869 148 aaKnown RBP3.66□□□□□ -1.82
CKS1B-204ENST00000471245 ZNF682O95780 498 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 GNAO1P09471 354 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 MUC1P15941 1255 aaPredicted RBP3.66□□□□□ -1.82
CKS1B-204ENST00000471245 PSMB6P28072 239 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 CRABP1P29762 137 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 MAS1LP35410 378 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 DGCR6Q14129 220 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 SMARCD3Q6STE5 483 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 CROCCP2Q86T23 111 aa3.66□□□□□ -1.82
CKS1B-204ENST00000471245 MKXQ8IYA7 352 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms