RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 C5orf51A6NDU8 294 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 H0Y980 276 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 L7N2F9 121 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 VENTXO95231 258 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 DUS4LO95620 317 aaKnown RBP3.77□□□□□ -1.81
SF3B1-208ENST00000470268 S100A9P06702 114 aaKnown RBP3.77□□□□□ -1.81
SF3B1-208ENST00000470268 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
SF3B1-208ENST00000470268 UCP1P25874 307 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 IL3RAP26951 378 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 CNTFRP26992 372 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 CEACAM3P40198 252 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 THBS3P49746 956 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 EXOSC2Q13868 293 aaKnown RBP3.77□□□□□ -1.81
SF3B1-208ENST00000470268 OPCMLQ14982 345 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 TMUB2Q71RG4 321 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF575Q86XF7 245 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 SGPP2Q8IWX5 399 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 OR8H3Q8N146 312 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF680Q8NEM1 530 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 RRNAD1Q96FB5 475 aaKnown RBP3.77□□□□□ -1.81
SF3B1-208ENST00000470268 PHB2Q99623 299 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM222Q9H0R3 208 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 SLC35D1Q9NTN3 355 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM160Q9NX00 188 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 OR5AC2Q9NZP5 309 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 GSKIPQ9P0R6 139 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 MBD2Q9UBB5 411 aa3.77□□□□□ -1.81
SF3B1-208ENST00000470268 A0A0G2JRQ6 117 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 LINC00862A6NCI5 91 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 RNF222A6NCQ9 220 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TSPAN4O14817 238 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 S1PR2O95136 353 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 CDS2O95674 445 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IFNA2P01563 188 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IGKV1D-33P01593 117 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IGKV1-33P01594 117 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IGKV1-5P01602 117 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IGLV2-23P01705 113 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IGHV4-59P01825 116 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 RPA2P15927 270 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 LPAR6P43657 344 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 F2RL1P55085 397 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TAS2R31P59538 309 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 FOXI1Q12951 378 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 CATR1Q13166 79 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 HNF4GQ14541 408 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 IZUMO4Q1ZYL8 232 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 C11orf87Q6NUJ2 197 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM65Q6PI78 240 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 ALKAL2Q6UX46 152 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 LYZL2Q7Z4W2 148 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 CCDC71LQ8N9Z2 235 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 ADTRPQ96IZ2 230 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM56Q96MV1 263 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 SSX3Q99909 188 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 RNF126Q9BV68 326 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 ARL6Q9H0F7 186 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 PRDM13Q9H4Q3 707 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 LIN7CQ9NUP9 197 aaKnown RBP3.76□□□□□ -1.81
SF3B1-208ENST00000470268 WASHC3Q9Y3C0 194 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 FAM96BQ9Y3D0 163 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM56-RWDD3S4R434 201 aa3.76□□□□□ -1.81
SF3B1-208ENST00000470268 TLN2Q9Y4G6 2542 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MXRA5Q9NR99 2828 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RPS10-NUDT3A0A1W2PQS6 291 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 H7C2Y5 167 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 I3L521 148 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 AP4M1O00189 453 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RBFOX2O43251 390 aaKnown RBP eCLIP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 KRASP01116 189 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RLN2P04090 185 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 FBP1P09467 338 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 NPSP0C0P6 89 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 P0C879 139 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 CD1BP29016 333 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 G6PCP35575 357 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 IER3P46695 156 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 DYNLT3P51808 116 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SSTP61278 116 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 EBI3Q14213 229 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MRGPRG-AS1Q2M3A8 158 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 FAM74A1Q5RGS3 127 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM268Q5VZI3 342 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM219Q86XT9 240 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 PDPNQ86YL7 162 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SELENOHQ8IZQ5 122 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 LINC00518Q8N0U6 118 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 Q8N6K4 173 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SLC35G3Q8N808 338 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 LRTM2Q8N967 370 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 BSCL2Q96G97 398 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MFFQ9GZY8 342 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 PLEKHA2Q9HB19 425 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 ZC4H2Q9NQZ6 224 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 KCNIP3Q9Y2W7 256 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms