RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IGFBP2P18065 325 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 DUX4L9Q6RFH8 374 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-209ENST00000470026 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 GCM1Q9NP62 436 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 FAM215AQ9Y5M1 114 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 UPK2O00526 184 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 FOXH1O75593 365 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 RAB4BP61018 213 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF788Q6ZQV5 615 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 SLC25A48Q6ZT89 311 aaKnown RBP11.17□□□□□ -0.62
BRCA1-209ENST00000470026 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 PNKDQ8N490 385 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 ESDP10768 282 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 SSX2Q16385 188 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 IGFL3Q6UXB1 125 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-209ENST00000470026 UHRF2Q96PU4 802 aa11.17□□□□□ -0.62
BRCA1-209ENST00000470026 RPUSD1Q9UJJ7 312 aaKnown RBP11.17□□□□□ -0.62
BRCA1-209ENST00000470026 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 MYOD1P15172 320 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 ADMP35318 185 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 DEFB109BQ30KR1 87 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
BRCA1-209ENST00000470026 TMEM256Q8N2U0 113 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 OR4P4Q8NGL7 312 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 SLC35E1Q96K37 410 aa11.16□□□□□ -0.62
BRCA1-209ENST00000470026 J3QR06 171 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 NUPR1O60356 82 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 OR10J4P0C629 311 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 LGALS4P56470 323 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 SSTP61278 116 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 HLA-DRB5Q30154 266 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 ZADH2Q8N4Q0 377 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 TMEM167BQ9NRX6 74 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 BET1LQ9NYM9 111 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 TP53TG3Q9ULZ0 132 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 RAI1Q7Z5J4 1906 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-209ENST00000470026 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 SPAARA0A1B0GVQ0 90 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF705GA8MUZ8 300 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-209ENST00000470026 MMP23AO75900 390 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 COL8A2P25067 703 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 TNFAIP6P98066 277 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-209ENST00000470026 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
BRCA1-209ENST00000470026 OR5G3P0C626 314 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 VHLLQ6RSH7 139 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 RPRMLQ8N4K4 120 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 OR1L8Q8NGR8 309 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 FKBP11Q9NYL4 201 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 V9GYV3 84 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 TEX50A0A1B0GTY4 177 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 A0A1B0GV90 55 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 OR4A8P0C604 315 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 LINC00310P59036 64 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 TAS2R60P59551 318 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 ZNF90Q03938 601 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 PARD6AQ9NPB6 346 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
BRCA1-209ENST00000470026 TP53TG5Q9Y2B4 290 aa11.14□□□□□ -0.63
BRCA1-209ENST00000470026 A8MXE2 369 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 IGKV1-16P04430 117 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
BRCA1-209ENST00000470026 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-209ENST00000470026 PQLC2Q6ZP29 291 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 CCL13Q99616 98 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 CADP27708 2225 aa11.13□□□□□ -0.63
BRCA1-209ENST00000470026 TRBV9A0A0B4J1U6 114 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 KIR2DL5BA0A0G2JN68 375 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 KIR2DL5BA0A0G2JPC4 375 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 SLC17A3O00476 420 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 HNF1AP20823 631 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 GNG10P50151 68 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 SELENOVP59797 346 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 PSG5Q15238 335 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 C1orf194Q5T5A4 169 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms