RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 HSPB7Q9UBY9 170 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 THBS3P49746 956 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 MKXQ8IYA7 352 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 OR4C5Q8NGB2 326 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
GPC1-208ENST00000469694 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.57
GPC1-208ENST00000469694 FRMD6-AS1P0C7T7 363 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 IER3P46695 156 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 TCTEX1D1Q8N7M0 179 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 RAXQ9Y2V3 346 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 K7ENP7 123 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 ZNF16P17020 682 aaPredicted RBP11.51□□□□□ -0.57
GPC1-208ENST00000469694 AMTP48728 403 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 PRRX1P54821 245 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 LGALS4P56470 323 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 HLA-DRB5Q30154 266 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 FGFRL1Q8N441 504 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 SCCPDHQ8NBX0 429 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
GPC1-208ENST00000469694 DPRXA6NFQ7 191 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 TFF1P04155 84 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 TRBV6-6A0A0A6YYG2 114 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 A0A1W2PS18 150 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 OR5B21A6NL26 309 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 SLC17A3O00476 420 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 DOLPP1Q86YN1 238 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 C1orf162Q8NEQ5 155 aaPredicted RBP11.5□□□□□ -0.57
GPC1-208ENST00000469694 FAM57AQ8TBR7 257 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.5□□□□□ -0.57
GPC1-208ENST00000469694 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 RAC2P15153 192 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 SAXO1Q8IYX7 474 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
GPC1-208ENST00000469694 GNB1LQ9BYB4 327 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
GPC1-208ENST00000469694 OR1A1Q9P1Q5 309 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 SLC25A15Q9Y619 301 aa11.5□□□□□ -0.57
GPC1-208ENST00000469694 IGHV2-26A0A0B4J1V2 119 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 C17orf112F2Z3M2 114 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 M0R1B8 84 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 REG1AP05451 166 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 TNFSF4P23510 183 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 CEBPDP49716 269 aaPredicted RBP11.49□□□□□ -0.57
GPC1-208ENST00000469694 OR10J3Q5JRS4 329 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 Q6ZR03 302 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 RAB1CQ92928 201 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 RTL8AQ9BWD3 113 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 SFXN3Q9BWM7 321 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 TRAV24A0A0B4J272 114 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 M0QZ24 198 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 TXNDC17Q9BRA2 123 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 CLN8Q9UBY8 286 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
GPC1-208ENST00000469694 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
GPC1-208ENST00000469694 TRAV38-1A0A0B4J264 116 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 CBY3A6NI87 242 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 WNT9BO14905 357 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 TIMM8AO60220 97 aaPredicted RBP11.48□□□□□ -0.57
GPC1-208ENST00000469694 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 GCSAMLQ5JQS6 135 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 PRAMEF6Q5VXH4 476 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 Q8N7P7 452 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 NCOR1P1Q9H4R4 102 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 IQCF6A8MYZ5 107 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 J3QT63 122 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 SIRPB1O00241 398 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 PMCHP20382 165 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 GFRALQ6UXV0 394 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 NIT1Q86X76 327 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 ST6GALNAC3Q8NDV1 305 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 USF3Q68DE3 2245 aa11.48□□□□□ -0.57
GPC1-208ENST00000469694 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 IGLC7A0M8Q6 106 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms