RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ZNF833PQ6ZTB9 187 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 HOGA1Q86XE5 327 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 TCTEX1D1Q8N7M0 179 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF439Q8NDP4 499 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 OR5H6Q8NGV6 325 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 OR4S2Q8NH73 311 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 TCTEX1D2Q8WW35 142 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ISOC1Q96CN7 298 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 SLC25A38Q96DW6 304 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ABHD14BQ96IU4 210 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 SCGB3A2Q96PL1 93 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 UHRF2Q96PU4 802 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 GPR61Q9BZJ8 451 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 SLC5A7Q9GZV3 580 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF107Q9UII5 783 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-208ENST00000469585 NF1P21359 2839 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 MEIS3P1A6NDR6 274 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 FOXI3A8MTJ6 420 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 DISC1C4P0D8 188 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 J3QRK9 145 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF701M0R085 212 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 SLC31A2O15432 143 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 CHST1O43916 411 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 DHFRP00374 187 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 NFYAP23511 347 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 PAX6P26367 422 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 SLC6A1P30531 599 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 TGFBR1P36897 503 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 TAS2R19P59542 299 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 GNB1P62873 340 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 CX3CL1P78423 397 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 MSMO1Q15800 293 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 RPL39P5Q59GN2 51 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 AADACL3Q5VUY0 350 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 PYHIN1Q6K0P9 492 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 PRR27Q6MZM9 219 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 NDUFA11Q86Y39 141 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 H1FOOQ8IZA3 346 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 DYNAPQ8N1N2 210 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 C5orf56Q8N8D9 126 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 CCDC71LQ8N9Z2 235 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 RNASE11Q8TAA1 199 aaKnown RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 ZFAND1Q8TCF1 268 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 NABP2Q9BQ15 211 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 IFI27L2Q9H2X8 130 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 PARP11Q9NR21 331 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF355PQ9NSJ1 428 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 METTL1Q9UBP6 276 aaKnown RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 ZMAT5Q9UDW3 170 aaKnown RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 SCP2D1Q9UJQ7 156 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 GAB2Q9UQC2 676 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 C14orf166Q9Y224 244 aaKnown RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 KCNK7Q9Y2U2 307 aa4.89□□□□□ -1.63
PTCD3-208ENST00000469585 TSSC4Q9Y5U2 329 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF469Q96JG9 3925 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ATRQ13535 2644 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 FABP12A6NFH5 140 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 CENPXA8MT69 81 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 H0YJW9 148 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 H3BMQ9 156 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 FCGR3BO75015 233 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 CRYZL1O95825 349 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 PPYP01298 95 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 PMP2P02689 132 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 EIF4EP06730 217 aaKnown RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 SERPINE2P07093 398 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ELK1P19419 428 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 HLA-DMAP28067 261 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 HRH1P35367 487 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 LINC01547P58512 204 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 EBI3Q14213 229 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 NSUN5P1Q3KNT7 163 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 SCGB2B2Q4G0G5 96 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 PYDC2Q56P42 97 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF660Q6AZW8 331 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 SLC25A42Q86VD7 318 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 SLC38A6Q8IZM9 456 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 Q8N2B8 174 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 DRAXINQ8NBI3 349 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 GIMAP1Q8WWP7 306 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ST6GALNAC6Q969X2 333 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF2Q9BSG1 426 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 PDCD10Q9BUL8 212 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 TOLLIPQ9H0E2 274 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF702PQ9H963 129 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 HRASLSQ9HDD0 168 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 SDHAF2Q9NX18 166 aa4.88□□□□□ -1.63
PTCD3-208ENST00000469585 RBMX2Q9Y388 322 aaKnown RBP4.88□□□□□ -1.63
PTCD3-208ENST00000469585 A0A087WYN8 130 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 GABARAPH6UMI1 98 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 GPR31O00270 319 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 B3GALNT1O75752 331 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 SNAPC5O75971 98 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 RAB3DO95716 219 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 IGHG2P01859 326 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 HLA-DRB1P01911 266 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 HLA-DQB1P01920 261 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 FCER2P06734 321 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms