RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 IRGMA1A4Y4 181 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 FABP5P3A8MUU1 101 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 E2F6O75461 281 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 LYPLA2O95372 231 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 PRM2P04554 102 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 MAGEA12P43365 314 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 IFITM2Q01629 132 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 SPA17Q15506 151 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 GUK1Q16774 197 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 TPRXLQ17RH7 258 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 SPOPLQ6IQ16 392 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 Q6ZS49 121 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 RPS19BP1Q86WX3 136 aaKnown RBP1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 LRRC25Q8N386 305 aaPredicted RBP1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 OR8J2Q8NGG1 315 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 OR2T4Q8NH00 348 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 ZNF625Q96I27 306 aaPredicted RBP1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 CHST6Q9GZX3 395 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 PRTFDC1Q9NRG1 225 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 COL5A3P25940 1745 aaPredicted RBP1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 FN1P02751 2386 aaKnown RBP1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 CUL9Q8IWT3 2517 aa1.28□□□□□ -2.2
SOX2-OT-204ENST00000469278 COL11A1P12107 1806 aaPredicted RBP1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 SNAPC4Q5SXM2 1469 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 MEIS3P1A6NDR6 274 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 ZNF737O75373 536 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 CRYZL1O95825 349 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 IGHV3-7P01780 117 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 HLA-DRB1P01911 266 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 CRPP02741 224 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 C1QAP02745 245 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 C1QCP02747 245 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 ANP32AP39687 249 aaKnown RBP1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 AQP4P55087 323 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 MYL6P60660 151 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 HBA1P69905 142 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 RGS21Q2M5E4 152 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 LPCAT3Q6P1A2 487 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 RPL22L1Q6P5R6 122 aaKnown RBP1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 KLK6Q92876 244 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 GINS4Q9BRT9 223 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 PARD6GQ9BYG4 376 aaPredicted RBP1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 CMTM6Q9NX76 183 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 PKIGQ9Y2B9 76 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 SORL1Q92673 2214 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 MALRD1Q5VYJ5 2156 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 HEATR5AQ86XA9 2040 aa1.27□□□□□ -2.21
SOX2-OT-204ENST00000469278 RALGAPA2Q2PPJ7 1873 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 REREQ9P2R6 1566 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 MUC6Q6W4X9 2439 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 MYO3BQ8WXR4 1341 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CLDN24A6NM45 220 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 F8W036 122 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 SDCBPO00560 298 aaPredicted RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 NAPSAO96009 420 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 METTL15P1P0C7V9 234 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CCL5P13501 91 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 RPS4Y1P22090 263 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BOP23527 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BBP33778 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 AKR1C3P42330 323 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CDKN2CP42773 168 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BDP58876 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BCP62807 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CCL20P78556 96 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 AESQ08117 197 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 KCNJ8Q15842 424 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST2H2BEQ16778 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 IBA57Q5T440 356 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 FAM27BQ5VT28 67 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 AADACL3Q5VUY0 350 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 C7orf65Q6ZTY9 151 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 DYNAPQ8N1N2 210 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 LINC00471Q8N535 108 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CLDN22Q8N7P3 220 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 WFDC11Q8NEX6 87 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 MRPL30Q8TCC3 161 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BHQ93079 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 C8orf76Q96K31 380 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 PPP1R2P1Q96PQ5 205 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BNQ99877 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 HIST1H2BMQ99879 126 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CMSS1Q9BQ75 279 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 NAA38Q9BRA0 125 aaKnown RBP1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 OR8D2Q9GZM6 311 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 OR51V1Q9H2C8 321 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CISHQ9NSE2 258 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 CR1P17927 2039 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 WDR90Q96KV7 1748 aa1.26□□□□□ -2.21
SOX2-OT-204ENST00000469278 VWDEQ8N2E2 1590 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 NUMA1Q14980 2115 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 RGS12O14924 1447 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 TRBV10-2A0A0K0K1G8 114 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 S100A6P06703 90 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 SERPINA6P08185 405 aa1.25□□□□□ -2.21
SOX2-OT-204ENST00000469278 UBBP0CG47 229 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms