RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TRPM6Q9BX84 2022 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 DOCK8Q8NF50 2099 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 DOCK3Q8IZD9 2030 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 EML5Q05BV3 1969 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TRBV6-6A0A0A6YYG2 114 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 A1L4Q6 167 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 SHISA7A6NL88 538 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 NPIPB11E5RHQ5 1161 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 H3BUT2 72 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 NKX2-8O15522 239 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 SPRY1O43609 319 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TLX3O43711 291 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 NEURL1O76050 574 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM50AO95807 157 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 EML2O95834 649 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 SLPIP03973 132 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 HLA-DRB4P13762 266 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 CD70P32970 193 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 CSN1S1P47710 185 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TIRAPP58753 221 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 IGLV3-21P80748 117 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PMP22Q01453 160 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 EGR4Q05215 589 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PLCXD2Q0VAA5 305 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 LY6DQ14210 128 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TRIP6Q15654 476 aaKnown RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 CLEC12BQ2HXU8 276 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 C19orf54Q5BKX5 351 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 ABHD17BQ5VST6 288 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM42Q69YG0 159 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 Q6Q795 121 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TCF23Q7RTU1 214 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 HAPLN4Q86UW8 402 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PRR22Q8IZ63 422 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 OSR2Q8N2R0 312 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TPRX1Q8N7U7 411 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 OR1L3Q8NH93 324 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 OCC1Q8TAD7 63 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 RLN3Q8WXF3 142 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 NUDT22Q9BRQ3 303 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 ANAPC13Q9BS18 74 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PIMREGQ9BSJ6 248 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 SLC25A33Q9BSK2 321 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 RBM24Q9BX46 236 aaKnown RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 C1QTNF4Q9BXJ3 329 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 FNDC4Q9H6D8 234 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PNRC2Q9NPJ4 139 aaKnown RBP4.04□□□□□ -1.76
SF3B1-207ENST00000468925 YAE1D1Q9NRH1 226 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 TNFRSF19Q9NS68 423 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PLAGL1Q9UM63 463 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 PSG8Q9UQ74 426 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 V9GYV3 84 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 HLA-DRB4X5D2U9 266 aa4.04□□□□□ -1.76
SF3B1-207ENST00000468925 COL4A6Q14031 1691 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 KIAA1549LQ6ZVL6 1849 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 HTTP42858 3142 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 LOC102723996A0A087X1L8 192 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 UBE2L5PA0A1B0GUS4 154 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TEX48A0A1B0GUV7 120 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1B0GW15 77 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE12JA6NER3 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 HELTA6NFD8 242 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 FNDC10F2Z333 226 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 H3BMG7 143 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 H3BSH0 61 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 KIR2DS3K7RE56 304 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 FOXH1O75593 365 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 PGLYRP1O75594 196 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE7O76087 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TGFAP01135 160 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 FCGR2AP12318 317 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 NPPCP23582 126 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 G6PCP35575 357 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ASIPP42127 132 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 FASLGP48023 281 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 CLDN17P56750 224 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF121P58317 390 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TAS2R45P59539 299 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ERVK11-1P61568 191 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 RPS18P62269 152 aaKnown RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SLC35B1P78383 322 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 PSG4Q00888 419 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GAGE4Q13068 117 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TNXAQ16473 311 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 GCSAMLQ5JQS6 135 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 CLLU1OSQ5K130 101 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ZFAND6Q6FIF0 208 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 EBLN2Q6P2I7 272 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SHISA6Q6ZSJ9 500 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 C6orf201Q7Z4U5 140 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TEX29Q8N6K0 151 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 STPG3Q8N7X2 389 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 BCORP1Q8N888 145 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 OR2M3Q8NG83 312 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 OR2T6Q8NHC8 308 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms