RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 ULBP3Q9BZM4 244 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 LINC00470Q9BZP3 86 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 CST9LQ9H4G1 147 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 LYRM2Q9NU23 88 aaPredicted RBP2.2□□□□□ -2.06
XRN1-207ENST00000468894 ACER3Q9NUN7 267 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 LAMTOR2Q9Y2Q5 125 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 ORC6Q9Y5N6 252 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 MYH4Q9Y623 1939 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 ZNF608Q9ULD9 1512 aaPredicted RBP2.2□□□□□ -2.06
XRN1-207ENST00000468894 NISCHQ9Y2I1 1504 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 N4BP2Q86UW6 1770 aaPredicted RBP2.2□□□□□ -2.06
XRN1-207ENST00000468894 KIF15Q9NS87 1388 aa2.2□□□□□ -2.06
XRN1-207ENST00000468894 MYO18AQ92614 2054 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 MYH1P12882 1939 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 CUL7Q14999 1698 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 PLCH2O75038 1416 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 NPHP4O75161 1426 aaPredicted RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 TRAV8-2A0A0B4J237 113 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 A0A0J9YY10 115 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 LOC100130705A0A1B0GUX0 176 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 SPAARA0A1B0GVQ0 90 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 A0A1B0GX51 115 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 A0A1B0GX78 115 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 PCNX2A6NKB5 2137 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 J3KT08 172 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 MRASO14807 208 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 GGCTO75223 188 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 IGHMP01871 453 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 ORM2P19652 201 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 HSPA9P38646 679 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 TAS2R30P59541 319 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 RPS28P62857 69 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 TNFAIP6P98066 277 aaPredicted RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 C1DQ13901 141 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 JOSD1Q15040 202 aaPredicted RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 PAFAH1B3Q15102 231 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 TMEM69Q5SWH9 247 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 TEX261Q6UWH6 196 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 HRCT1Q6UXD1 115 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 SCGB1D4Q6XE38 83 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 DGAT2L6Q6ZPD8 337 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 DAZ4Q86SG3 579 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 OR8B12Q8NGG6 310 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 OR13C8Q8NGS7 320 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 ZNF420Q8TAQ5 688 aaPredicted RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 ZNF675Q8TD23 568 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 CCL17Q92583 94 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 TRIB3Q96RU7 358 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 METTL26Q96S19 204 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 PDCD10Q9BUL8 212 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 CACYBPQ9HB71 228 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 HES4Q9HCC6 221 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 DAZ1Q9NQZ3 744 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 RBFOX1Q9NWB1 397 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 RBM12B-AS1Q9P1G2 102 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 RSL24D1Q9UHA3 163 aaKnown RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 ZFP30Q9Y2G7 519 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 KMT2BQ9UMN6 2715 aaPredicted RBP2.19□□□□□ -2.06
XRN1-207ENST00000468894 SCN8AQ9UQD0 1980 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 ROBO3Q96MS0 1386 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 MYH8P13535 1937 aa2.19□□□□□ -2.06
XRN1-207ENST00000468894 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 SSH2Q76I76 1423 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 ABCA3Q99758 1704 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 TRAV26-2A0A0B4J265 109 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 FAM183AA6NL82 134 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 SIGLEC16A6NMB1 481 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 LEUTXA8MZ59 168 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 H3BP45 60 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 K7EPK0 472 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 M0R1X1 148 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 CORTO00230 105 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 PDCD6O75340 191 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 PGLYRP1O75594 196 aaPredicted RBP2.18□□□□□ -2.06
XRN1-207ENST00000468894 OR2A4O95047 310 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 KCNK2O95069 426 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 LGALS1P09382 135 aaKnown RBP2.18□□□□□ -2.06
XRN1-207ENST00000468894 CTLA4P16410 223 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 FGF7P21781 194 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 CNTFRP26992 372 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 CASP1P29466 404 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 GABRA2P47869 451 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 PSMB2P49721 201 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 POLR2HP52434 150 aaKnown RBP2.18□□□□□ -2.06
XRN1-207ENST00000468894 CTBP2P56545 445 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 DAD1P61803 113 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 PPP3R1P63098 170 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 BTN1A1Q13410 526 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 ZNF181Q2M3W8 571 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 DEFB134Q4QY38 66 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 PDZD9Q8IXQ8 264 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 C20orf196Q8IYI0 205 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 TMEM86AQ8N2M4 240 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 C9orf62Q8N4C0 152 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 DEFB125Q8N687 156 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 LINC00337Q8N6G1 96 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 OR4E2Q8NGC2 313 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 OR8S1Q8NH09 359 aa2.18□□□□□ -2.06
XRN1-207ENST00000468894 ORAOV1Q8WV07 137 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms