RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PPIAL4CA0A0B4J2A2 164 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 SMCO3A2RU48 225 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 A6NNC1 897 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 LY6LH3BQJ8 138 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 BUB1B-PAK6H3BSN5 160 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 CA2P00918 260 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 IGKV1D-33P01593 117 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 IGKV1-33P01594 117 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 IGLV2-23P01705 113 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 IFNA4P05014 189 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 PPIAL4GP0DN37 164 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 FOLR2P14207 255 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 COMPP49747 757 aaPredicted RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 ERHP84090 104 aaKnown RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 SSX2Q16385 188 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 VMA21Q3ZAQ7 101 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 RNF212Q495C1 297 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 FFAR4Q5NUL3 377 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM144Q7Z5S9 345 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 KIR3DL3Q8N743 410 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 C15orf54Q8N8G6 183 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 OR11H6Q8NGC7 330 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 SRSF8Q9BRL6 282 aaKnown RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 COMMD5Q9GZQ3 224 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 VSIRQ9H7M9 311 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM242Q9NWH2 141 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 TPRP12270 2363 aaKnown RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 RELNP78509 3460 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 YLPM1P49750 1951 aaKnown RBP6.17□□□□□ -1.42
COL6A3-208ENST00000468792 LRBAP50851 2863 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 C7orf77A4D0Y5 90 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 OOSP1A8MZH6 123 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 TSPAN4O14817 238 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 CRYGBP07316 175 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 SOD3P08294 240 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 RNASE2P10153 161 aaKnown RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRTN3P24158 256 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 SUB1P53999 127 aaKnown RBP eCLIP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRR20EP86478 221 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRR20CP86479 221 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRR20DP86480 221 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRR20BP86481 221 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRR20AP86496 221 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 HABP2Q14520 560 aaPredicted RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 ARSJQ5FYB0 599 aaPredicted RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 MMD2Q8IY49 270 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 ZNF114Q8NC26 417 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 C1orf159Q96HA4 380 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 SLC35E1Q96K37 410 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 NIPSNAP3BQ9BS92 247 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 GGTLC1Q9BX51 225 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 SIRT7Q9NRC8 400 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 PRELID1Q9Y255 219 aa6.16□□□□□ -1.42
COL6A3-208ENST00000468792 TMA7Q9Y2S6 64 aaKnown RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 HRNRQ86YZ3 2850 aaPredicted RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 TET2Q6N021 2002 aaPredicted RBP6.16□□□□□ -1.42
COL6A3-208ENST00000468792 IGHV1-3A0A0C4DH29 117 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 MED19A0JLT2 244 aaPredicted RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 COLCA2A8K830 154 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 H3BQ15 152 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 MT-ND4LP03901 98 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 STAG3L2P0CL84 134 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 STAG3L3P0CL85 134 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 OR13C7P0DN81 318 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 CDC34P49427 236 aaPredicted RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 EFNA4P52798 201 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 ELLP55199 621 aaPredicted RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 FLI1Q01543 452 aaPredicted RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.42
COL6A3-208ENST00000468792 CD69Q07108 199 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 HAGHQ16775 308 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 AWAT1Q58HT5 328 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 SPINK9Q5DT21 86 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 FAM90A2PQ658T7 463 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 SSX7Q7RTT5 188 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 OR4P4Q8NGL7 312 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 NANPQ8TBE9 248 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 TVP23CQ96ET8 276 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 MGST2Q99735 147 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 ZNRD1Q9P1U0 126 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 GNG13Q9P2W3 67 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 INSIG2Q9Y5U4 225 aa6.15□□□□□ -1.42
COL6A3-208ENST00000468792 TNCP24821 2201 aa6.15□□□□□ -1.43
COL6A3-208ENST00000468792 CFAP46Q8IYW2 2715 aa6.15□□□□□ -1.43
COL6A3-208ENST00000468792 SPTBN1Q01082 2364 aaKnown RBP6.15□□□□□ -1.43
COL6A3-208ENST00000468792 DCHS2Q6V1P9 2916 aa6.15□□□□□ -1.43
COL6A3-208ENST00000468792 LOC105371242A0A075B767 164 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 A0A1W2PPV4 95 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms