RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PGLYRP1O75594 196 aaPredicted RBP18.29■□□□□ 0.52
PTCH1-210ENST00000468211 PMP2P02689 132 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 OR13C7P0DN81 318 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 ZNF585BQ52M93 769 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 PLET1Q6UQ28 207 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 GDPD1Q8N9F7 314 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 MOB3AQ96BX8 217 aa18.29■□□□□ 0.52
PTCH1-210ENST00000468211 ZNF2Q9BSG1 426 aaPredicted RBP18.29■□□□□ 0.52
PTCH1-210ENST00000468211 TMEM127O75204 238 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 FGF2P09038 288 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 TRAPPC2P0DI81 140 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 TRAPPC2BP0DI82 140 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 TAS2R20P59543 309 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 LSM3P62310 102 aaKnown RBP18.28■□□□□ 0.52
PTCH1-210ENST00000468211 UBE2NLQ5JXB2 153 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 SAMD12Q8N8I0 201 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 FCAMRQ8WWV6 532 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 ZNF436Q9C0F3 470 aaPredicted RBP18.28■□□□□ 0.52
PTCH1-210ENST00000468211 FXYD6Q9H0Q3 95 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 NSG2Q9Y328 171 aa18.28■□□□□ 0.52
PTCH1-210ENST00000468211 BIRC6Q9NR09 4857 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 IGHV3-21A0A0B4J1V1 117 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 MARCH11A6NNE9 402 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 TGOLN2O43493 480 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 SERPINE2P07093 398 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 NAT1P18440 290 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 F2RP25116 425 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 LPAR6P43657 344 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 MARC2Q969Z3 335 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 YIPF6Q96EC8 236 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 NDUFA4L2Q9NRX3 87 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 THYN1Q9P016 225 aa18.27■□□□□ 0.52
PTCH1-210ENST00000468211 MRPL27Q9P0M9 148 aaKnown RBP18.27■□□□□ 0.52
PTCH1-210ENST00000468211 KRASP01116 189 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 TMEM69Q5SWH9 247 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 SLC25A24Q6NUK1 477 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 LYSMD2Q8IV50 215 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 OR1L8Q8NGR8 309 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 VN1R17PQ8TDU5 208 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 OVOL2Q9BRP0 275 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 GGTLC1Q9BX51 225 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 UFC1Q9Y3C8 167 aa18.26■□□□□ 0.51
PTCH1-210ENST00000468211 OR2T8A6NH00 312 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 G6PCP35575 357 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 ELLP55199 621 aaPredicted RBP18.25■□□□□ 0.51
PTCH1-210ENST00000468211 ERVK-16P61578 105 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 CROCCP3Q8IVE0 287 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 OR5H2Q8NGV7 314 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 IL17DQ8TAD2 202 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 TMEM190Q8WZ59 177 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 DGCR14Q96DF8 476 aaKnown RBP18.25■□□□□ 0.51
PTCH1-210ENST00000468211 CHRDL1Q9BU40 450 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 HINT2Q9BX68 163 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 ALMS1Q8TCU4 4167 aa18.25■□□□□ 0.51
PTCH1-210ENST00000468211 TRAV25A0A0B4J276 109 aa18.24■□□□□ 0.51
PTCH1-210ENST00000468211 DBX1A6NMT0 343 aa18.24■□□□□ 0.51
PTCH1-210ENST00000468211 F8W735 103 aaPredicted RBP18.24■□□□□ 0.51
PTCH1-210ENST00000468211 ANKRD55Q3KP44 614 aa18.24■□□□□ 0.51
PTCH1-210ENST00000468211 THOC7Q6I9Y2 204 aaKnown RBP18.24■□□□□ 0.51
PTCH1-210ENST00000468211 RBPMS2Q6ZRY4 209 aaKnown RBP18.24■□□□□ 0.51
PTCH1-210ENST00000468211 BORCS5Q969J3 196 aa18.24■□□□□ 0.51
PTCH1-210ENST00000468211 OR51B2Q9Y5P1 312 aa18.24■□□□□ 0.51
PTCH1-210ENST00000468211 F11RQ9Y624 299 aaKnown RBP18.24■□□□□ 0.51
PTCH1-210ENST00000468211 LOC102724200A0A096LPH7 203 aaPredicted RBP18.23■□□□□ 0.51
PTCH1-210ENST00000468211 OR1L6Q8NGR2 347 aa18.23■□□□□ 0.51
PTCH1-210ENST00000468211 IGHV3OR16-8A0A075B7F1 116 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 EIF4EP06730 217 aaKnown RBP18.22■□□□□ 0.51
PTCH1-210ENST00000468211 HLA-DMAP28067 261 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 PRSS3P35030 304 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 ADMP35318 185 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 HRH1P35367 487 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 TAS2R46P59540 309 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 HSD17B13Q7Z5P4 300 aaPredicted RBP18.22■□□□□ 0.51
PTCH1-210ENST00000468211 OR2C3Q8N628 320 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 SCARB1Q8WTV0 552 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 LSM10Q969L4 123 aaKnown RBP18.22■□□□□ 0.51
PTCH1-210ENST00000468211 ZNF414Q96IQ9 312 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 C5orf66Q9H5L9 145 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 UBQLN2Q9UHD9 624 aa18.22■□□□□ 0.51
PTCH1-210ENST00000468211 K7EIM0 57 aa18.21■□□□□ 0.51
PTCH1-210ENST00000468211 GPR31O00270 319 aa18.21■□□□□ 0.51
PTCH1-210ENST00000468211 PHLDA2Q53GA4 152 aa18.21■□□□□ 0.51
PTCH1-210ENST00000468211 OR6F1Q8NGZ6 308 aa18.21■□□□□ 0.51
PTCH1-210ENST00000468211 BSCL2Q96G97 398 aaPredicted RBP18.21■□□□□ 0.51
PTCH1-210ENST00000468211 C21orf62Q9NYP8 219 aa18.21■□□□□ 0.51
PTCH1-210ENST00000468211 CYB5BO43169 146 aa18.2■□□□□ 0.5
PTCH1-210ENST00000468211 ZNF207O43670 478 aaKnown RBP18.2■□□□□ 0.5
PTCH1-210ENST00000468211 JTBO76095 146 aa18.2■□□□□ 0.5
PTCH1-210ENST00000468211 CMTM1Q8IZ96 169 aa18.2■□□□□ 0.5
PTCH1-210ENST00000468211 CADM3Q8N126 398 aa18.2■□□□□ 0.5
PTCH1-210ENST00000468211 GPX8Q8TED1 209 aa18.2■□□□□ 0.5
PTCH1-210ENST00000468211 DAZ1Q9NQZ3 744 aaKnown RBP18.2■□□□□ 0.5
PTCH1-210ENST00000468211 SNAPC5O75971 98 aa18.19■□□□□ 0.5
PTCH1-210ENST00000468211 UBAC2Q8NBM4 344 aa18.19■□□□□ 0.5
PTCH1-210ENST00000468211 SLC25A46Q96AG3 418 aa18.19■□□□□ 0.5
PTCH1-210ENST00000468211 SPAG8Q99932 426 aaPredicted RBP18.19■□□□□ 0.5
PTCH1-210ENST00000468211 C20orf24Q9BUV8 137 aa18.19■□□□□ 0.5
PTCH1-210ENST00000468211 TSPAN4O14817 238 aa18.18■□□□□ 0.5
PTCH1-210ENST00000468211 EWSR1Q01844 656 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTCH1-210ENST00000468211 SPSB3Q6PJ21 355 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms