RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 LRRC25Q8N386 305 aaPredicted RBP1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 TMEM86BQ8N661 226 aa1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 OR51D1Q8NGF3 324 aa1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 HSPB9Q9BQS6 159 aa1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 OR8D2Q9GZM6 311 aa1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 SCAF11Q99590 1463 aaKnown RBP1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 NAV1Q8NEY1 1877 aa1.8□□□□□ -2.12
GAPVD1-211ENST00000467707 CIAO1O76071 339 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 PPBPP02775 128 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 METTL15P1P0C7V9 234 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 MRPL30Q8TCC3 161 aaKnown RBP1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 COMMD5Q9GZQ3 224 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 WDR61Q9GZS3 305 aaKnown RBP1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 CYSTM1Q9H1C7 97 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 PRTFDC1Q9NRG1 225 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 PLB1Q6P1J6 1458 aa1.79□□□□□ -2.12
GAPVD1-211ENST00000467707 ARHGAP32A7KAX9 2087 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 MPDZO75970 2070 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 GGT3PA6NGU5 568 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 ZNF705BP0CI00 300 aaPredicted RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 HIST1H1TP22492 207 aaPredicted RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 MAGEA12P43365 314 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 AQP4P55087 323 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 ACOT6Q3I5F7 207 aaPredicted RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 RPL22L1Q6P5R6 122 aaKnown RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 RPS19BP1Q86WX3 136 aaKnown RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 MCFD2Q8NI22 146 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 MBD3L1Q8WWY6 194 aa1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 AMMECR1Q9Y4X0 333 aaPredicted RBP1.78□□□□□ -2.12
GAPVD1-211ENST00000467707 IGKV2-29A2NJV5 120 aaPredicted RBP1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 RPP14O95059 124 aaKnown RBP1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 TRGC1P0CF51 173 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BOP23527 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BBP33778 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BDP58876 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BCP62807 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 STX5Q13190 355 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 ITGB3BPQ13352 177 aaPredicted RBP1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 ELOBQ15370 118 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST2H2BEQ16778 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 FAM27BQ5VT28 67 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 C11orf40Q8WZ69 217 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BHQ93079 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 DCUN1D1Q96GG9 259 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 CCDC42Q96M95 316 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BNQ99877 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 HIST1H2BMQ99879 126 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 PARD6GQ9BYG4 376 aaPredicted RBP1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 CISHQ9NSE2 258 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 SIPA1L1O43166 1804 aa1.77□□□□□ -2.13
GAPVD1-211ENST00000467707 SCN9AQ15858 1988 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 MYO3BQ8WXR4 1341 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 TGIF2-C20orf24A0A0A6YYL0 155 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 PQLC2LA1A4F0 135 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 TRAPPC13A5PLN9 417 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 CHP2O43745 196 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 ORC5O43913 435 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 E2F6O75461 281 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 HLA-DRB1P01911 266 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 DEFA4P12838 97 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 GPX2P18283 190 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 ZNF80P51504 273 aaPredicted RBP1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 SNRPD2P62316 118 aaKnown RBP1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 LPCAT3Q6P1A2 487 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 TRAPPC5Q8IUR0 188 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 OR8B3Q8NGG8 313 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 OR13C4Q8NGS5 318 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 OR2T4Q8NH00 348 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 RASSF5Q8WWW0 418 aa1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 MRPL32Q9BYC8 188 aaKnown RBP1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 MDC1Q14676 2089 aaKnown RBP1.76□□□□□ -2.13
GAPVD1-211ENST00000467707 CLDN24A6NM45 220 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 Q1T7F1 81 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 ARHGAP11BQ3KRB8 267 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 SPANXN3Q5MJ09 141 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 AADACL3Q5VUY0 350 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 SPOPLQ6IQ16 392 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 DHFR2Q86XF0 187 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 CLDN22Q8N7P3 220 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 NIPSNAP1Q9BPW8 284 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 DERL1Q9BUN8 251 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 NISCHQ9Y2I1 1504 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 DOCK10Q96BY6 2186 aa1.75□□□□□ -2.13
GAPVD1-211ENST00000467707 GBF1Q92538 1859 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 KPNA3O00505 521 aaPredicted RBP1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 SDCBPO00560 298 aaPredicted RBP1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 RPSAP08865 295 aaKnown RBP1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 RPS4Y1P22090 263 aaKnown RBP1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 HBA1P69905 142 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 NNATQ16517 81 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 Q96M85 177 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 CMTM6Q9NX76 183 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 FBXL12Q9NXK8 326 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 MRPL27Q9P0M9 148 aaKnown RBP1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 WDR90Q96KV7 1748 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
GAPVD1-211ENST00000467707 NUP155O75694 1391 aa1.73□□□□□ -2.13
GAPVD1-211ENST00000467707 SMARCA4P51532 1647 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms