RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 POLR1DQ9Y2S0 133 aa0.44□□□□□ -2.34
SMC4-207ENST00000467263 C1orf232A0A0U1RR37 186 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 FABP12A6NFH5 140 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 SHBGP04278 402 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 AAED1Q7RTV5 226 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 TMEM161BQ8NDZ6 487 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 CHMP4BQ9H444 224 aaKnown RBP0.43□□□□□ -2.34
SMC4-207ENST00000467263 EML6Q6ZMW3 1958 aa0.43□□□□□ -2.34
SMC4-207ENST00000467263 NOS1APO75052 506 aaPredicted RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 KRT75O95678 551 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 SRP19P09132 144 aaKnown RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 RPS4Y1P22090 263 aaKnown RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 MAP2K4P45985 399 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 RPL18Q07020 188 aaKnown RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 FABP9Q0Z7S8 132 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 CST9Q5W186 159 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 TNFAIP8L2Q6P589 184 aaPredicted RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 WFDC11Q8NEX6 87 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 C7orf50Q9BRJ6 194 aaKnown RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 IL36BQ9NZH7 164 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 ZFP30Q9Y2G7 519 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 C15orf41Q9Y2V0 281 aa0.42□□□□□ -2.34
SMC4-207ENST00000467263 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
SMC4-207ENST00000467263 RALGAPA2Q2PPJ7 1873 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 ZFC3H1O60293 1989 aaKnown RBP0.41□□□□□ -2.34
SMC4-207ENST00000467263 DISC1C4P0D8 188 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 GOLGA8MH3BSY2 632 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 YEATS4O95619 227 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 C1QAP02745 245 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 CLPSP04118 112 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 KRT7P08729 469 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 ZNF93P35789 620 aaPredicted RBP0.41□□□□□ -2.34
SMC4-207ENST00000467263 MGAT3Q09327 533 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 RSU1Q15404 277 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 KISS1Q15726 138 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 LCN15Q6UWW0 184 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 COMMD7Q86VX2 200 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 APCP25054 2843 aa0.41□□□□□ -2.34
SMC4-207ENST00000467263 RAD50Q92878 1312 aa0.4□□□□□ -2.34
SMC4-207ENST00000467263 TNRC6AQ8NDV7 1962 aaKnown RBP0.4□□□□□ -2.35
SMC4-207ENST00000467263 C19orf84I3L1E1 186 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 TYMSP04818 313 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 FAM228BP0C875 321 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 FGF6P10767 208 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 PSMB6P28072 239 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 UBE2G2P60604 165 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 DMTNQ08495 405 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 C11orf40Q8WZ69 217 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 COL4A5P29400 1685 aa0.4□□□□□ -2.35
SMC4-207ENST00000467263 LOC110117498A0A087WWA1 95 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 COCHO43405 550 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 FADS1O60427 444 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 OR5F1O95221 314 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 OCMP0CE72 109 aaPredicted RBP0.39□□□□□ -2.35
SMC4-207ENST00000467263 KCNE1P15382 129 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 BRS3P32247 399 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 ZNF80P51504 273 aaPredicted RBP0.39□□□□□ -2.35
SMC4-207ENST00000467263 SYPL2Q5VXT5 272 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 ZNF550Q7Z398 422 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 Q8N402 240 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 LINC00471Q8N535 108 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 TMEM106AQ96A25 262 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 ROPN1LQ96C74 230 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 DIRAS2Q96HU8 199 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 UPF3BQ9BZI7 483 aaKnown RBP0.39□□□□□ -2.35
SMC4-207ENST00000467263 OR51I2Q9H344 312 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 MAP1LC3AQ9H492 121 aa0.39□□□□□ -2.35
SMC4-207ENST00000467263 IGKV1D-42A0A075B6H8 117 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 FUOMA2VDF0 154 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 FABP5P3A8MUU1 101 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 PRM2P04554 102 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 FKBP2P26885 142 aaKnown RBP0.38□□□□□ -2.35
SMC4-207ENST00000467263 MAP3K7CLP57077 242 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 LINC00526Q96FQ7 95 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 HDHD2Q9H0R4 259 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 EFCAB1Q9HAE3 211 aa0.38□□□□□ -2.35
SMC4-207ENST00000467263 GOLGA8KD6RF30 607 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 PFDN6O15212 129 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 SSNA1O43805 119 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 CALUO43852 315 aaPredicted RBP0.37□□□□□ -2.35
SMC4-207ENST00000467263 CD151P48509 253 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 BATFQ16520 125 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 SBSPONQ8IVN8 264 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 SLC50A1Q9BRV3 221 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 PLEKHJ1Q9NW61 149 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 KLK9Q9UKQ9 250 aa0.37□□□□□ -2.35
SMC4-207ENST00000467263 RPL12P30050 165 aaKnown RBP0.36□□□□□ -2.35
SMC4-207ENST00000467263 CAV1Q03135 178 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 IBA57Q5T440 356 aaKnown RBP0.36□□□□□ -2.35
SMC4-207ENST00000467263 C1orf195Q5TG92 126 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 GLT8D1Q68CQ7 371 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 ZNF826PQ6ZT77 177 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 Q8N6K4 173 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 FAM96AQ9H5X1 160 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 CISHQ9NSE2 258 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 IMP3Q9NV31 184 aaKnown RBP0.36□□□□□ -2.35
SMC4-207ENST00000467263 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
SMC4-207ENST00000467263 A0A0J9YY10 115 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms