RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 OR8H1Q8NGG4 311 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 ZNF48Q96MX3 618 aaPredicted RBP10.33□□□□□ -0.76
COL4A1-202ENST00000467182 COMMD5Q9GZQ3 224 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 PRDM13Q9H4Q3 707 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 FBXL17Q9UF56 701 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 FAM96BQ9Y3D0 163 aa10.33□□□□□ -0.76
COL4A1-202ENST00000467182 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
COL4A1-202ENST00000467182 H3BUX3 64 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 LY86O95711 162 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 RPL27AP46776 148 aaKnown RBP10.32□□□□□ -0.76
COL4A1-202ENST00000467182 HOXA1P49639 335 aaPredicted RBP10.32□□□□□ -0.76
COL4A1-202ENST00000467182 SULT1A1P50225 295 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 BAXQ07812 192 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 STPG2Q8N412 459 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 RBM14Q96PK6 669 aaKnown RBP10.32□□□□□ -0.76
COL4A1-202ENST00000467182 ARPC5LQ9BPX5 153 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 HINT2Q9BX68 163 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
COL4A1-202ENST00000467182 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 IGLC7A0M8Q6 106 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
COL4A1-202ENST00000467182 PRSS46E5RG02 174 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 CST7O76096 145 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 AMY1AP04745 511 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 METTL15P1P0C7V9 234 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 NDPQ00604 133 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 C22orf15Q8WYQ4 148 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 SLC25A33Q9BSK2 321 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 HEYLQ9NQ87 328 aaPredicted RBP10.31□□□□□ -0.76
COL4A1-202ENST00000467182 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
COL4A1-202ENST00000467182 STRAPQ9Y3F4 350 aaKnown RBP10.31□□□□□ -0.76
COL4A1-202ENST00000467182 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 IGHV7-81A0A0B4J1V7 117 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 A0A1W2PN81 502 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 TAAR5O14804 337 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 CFDP00746 253 aaPredicted RBP10.3□□□□□ -0.76
COL4A1-202ENST00000467182 HLA-DRB1P01911 266 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
COL4A1-202ENST00000467182 EGR2P11161 476 aaPredicted RBP10.3□□□□□ -0.76
COL4A1-202ENST00000467182 C4BPBP20851 252 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 CHRNA7P36544 502 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 IER3P46695 156 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 GNB1P62873 340 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 PLGLAQ15195 96 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 Q6YL49 198 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 TMEM219Q86XT9 240 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 SRSF12Q8WXF0 261 aaKnown RBP10.3□□□□□ -0.76
COL4A1-202ENST00000467182 HSPB9Q9BQS6 159 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 SMIM3Q9BZL3 60 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 SLA2Q9H6Q3 261 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 ZC4H2Q9NQZ6 224 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 U3KQ87 197 aa10.3□□□□□ -0.76
COL4A1-202ENST00000467182 FGF16O43320 207 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 AREGP15514 252 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 CX3CL1P78423 397 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 FXYD3Q14802 87 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 LY6EQ16553 131 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 C2orf83Q53S99 150 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
COL4A1-202ENST00000467182 SPNS3Q6ZMD2 512 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 SLC51BQ86UW2 128 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 STX12Q86Y82 276 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 TMEM217Q8N7C4 229 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 STOML3Q8TAV4 291 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 SMR3AQ99954 134 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 TMUB1Q9BVT8 246 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 ARV1Q9H2C2 271 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 ENY2Q9NPA8 101 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 MOB4Q9Y3A3 225 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 FBXO7Q9Y3I1 522 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 OTOGQ6ZRI0 2925 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 MYO9AB2RTY4 2548 aa10.29□□□□□ -0.76
COL4A1-202ENST00000467182 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
COL4A1-202ENST00000467182 ACTL6BO94805 426 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 IFNA10P01566 189 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 NPY1RP25929 384 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 HTR2BP41595 481 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 ZNF114Q8NC26 417 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 OR1S2Q8NGQ3 325 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 P2RX4Q99571 388 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms